Gene : Tp57577_TGAC_v2_gene10474 T. pratense v2
Defline:  (1 of 1) PTHR12820 - VACUOLAR SORTING PROTEIN 53 Genomic Order:  30
Name:  ? Tp57577_TGAC_v2_gene10474 Secondary Identifier:  ? PAC:35968962
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene10474 0.5kb upstream 0.5kb upstream 11927 true Tp57577_TGAC_v2_scaf_217: 275024-286950 Trifolium pratense
Tp57577_TGAC_v2_gene10474 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_217: 275024-275523 Trifolium pratense
Tp57577_TGAC_v2_gene10474 0.5kb downstream 0.5kb downstream 11927 true Tp57577_TGAC_v2_scaf_217: 275524-287450 Trifolium pratense
Tp57577_TGAC_v2_gene10474 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_217: 286951-287450 Trifolium pratense
Tp57577_TGAC_v2_gene10474 1.0kb upstream 1.0kb upstream 12427 true Tp57577_TGAC_v2_scaf_217: 274524-286950 Trifolium pratense
Tp57577_TGAC_v2_gene10474 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_217: 274524-275523 Trifolium pratense
Tp57577_TGAC_v2_gene10474 1.0kb downstream 1.0kb downstream 12427 true Tp57577_TGAC_v2_scaf_217: 275524-287950 Trifolium pratense
Tp57577_TGAC_v2_gene10474 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_217: 286951-287950 Trifolium pratense
Tp57577_TGAC_v2_gene10474 2.0kb upstream 2.0kb upstream 13427 true Tp57577_TGAC_v2_scaf_217: 273524-286950 Trifolium pratense
Tp57577_TGAC_v2_gene10474 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_217: 273524-275523 Trifolium pratense
Tp57577_TGAC_v2_gene10474 2.0kb downstream 2.0kb downstream 13427 true Tp57577_TGAC_v2_scaf_217: 275524-288950 Trifolium pratense
Tp57577_TGAC_v2_gene10474 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_217: 286951-288950 Trifolium pratense
Tp57577_TGAC_v2_gene10474 5.0kb upstream 5.0kb upstream 16427 true Tp57577_TGAC_v2_scaf_217: 270524-286950 Trifolium pratense
Tp57577_TGAC_v2_gene10474 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_217: 270524-275523 Trifolium pratense
Tp57577_TGAC_v2_gene10474 5.0kb downstream 5.0kb downstream 16427 true Tp57577_TGAC_v2_scaf_217: 275524-291950 Trifolium pratense
Tp57577_TGAC_v2_gene10474 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_217: 286951-291950 Trifolium pratense
Tp57577_TGAC_v2_gene10474 10.0kb upstream 10.0kb upstream 21427 true Tp57577_TGAC_v2_scaf_217: 265524-286950 Trifolium pratense
Tp57577_TGAC_v2_gene10474 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_217: 265524-275523 Trifolium pratense
Tp57577_TGAC_v2_gene10474 10.0kb downstream 10.0kb downstream 21427 true Tp57577_TGAC_v2_scaf_217: 275524-296950 Trifolium pratense
Tp57577_TGAC_v2_gene10474 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_217: 286951-296950 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308975 5265 Fabidae View MSA
124060785 5270 Rosid View MSA
123745504 5271 Pentapetalae View MSA
122792209 5272 Eudicot View MSA
122042616 5273 Angiosperm View MSA
121345322 5274 Embryophyte View MSA
123426739 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain