Gene : Tp57577_TGAC_v2_gene26671 T. pratense v2
Defline:  (1 of 2) PTHR37236:SF1 - AUXIN-BINDING PROTEIN 1 Genomic Order:  8
Name:  ? Tp57577_TGAC_v2_gene26671 Secondary Identifier:  ? PAC:35959333
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene26671 0.5kb upstream 0.5kb upstream 4029 true Tp57577_TGAC_v2_scaf_142: 69367-73395 Trifolium pratense
Tp57577_TGAC_v2_gene26671 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_142: 72896-73395 Trifolium pratense
Tp57577_TGAC_v2_gene26671 0.5kb downstream 0.5kb downstream 4029 true Tp57577_TGAC_v2_scaf_142: 68867-72895 Trifolium pratense
Tp57577_TGAC_v2_gene26671 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_142: 68867-69366 Trifolium pratense
Tp57577_TGAC_v2_gene26671 1.0kb upstream 1.0kb upstream 4529 true Tp57577_TGAC_v2_scaf_142: 69367-73895 Trifolium pratense
Tp57577_TGAC_v2_gene26671 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_142: 72896-73895 Trifolium pratense
Tp57577_TGAC_v2_gene26671 1.0kb downstream 1.0kb downstream 4529 true Tp57577_TGAC_v2_scaf_142: 68367-72895 Trifolium pratense
Tp57577_TGAC_v2_gene26671 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_142: 68367-69366 Trifolium pratense
Tp57577_TGAC_v2_gene26671 2.0kb upstream 2.0kb upstream 5529 true Tp57577_TGAC_v2_scaf_142: 69367-74895 Trifolium pratense
Tp57577_TGAC_v2_gene26671 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_142: 72896-74895 Trifolium pratense
Tp57577_TGAC_v2_gene26671 2.0kb downstream 2.0kb downstream 5529 true Tp57577_TGAC_v2_scaf_142: 67367-72895 Trifolium pratense
Tp57577_TGAC_v2_gene26671 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_142: 67367-69366 Trifolium pratense
Tp57577_TGAC_v2_gene26671 5.0kb upstream 5.0kb upstream 8529 true Tp57577_TGAC_v2_scaf_142: 69367-77895 Trifolium pratense
Tp57577_TGAC_v2_gene26671 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_142: 72896-77895 Trifolium pratense
Tp57577_TGAC_v2_gene26671 5.0kb downstream 5.0kb downstream 8529 true Tp57577_TGAC_v2_scaf_142: 64367-72895 Trifolium pratense
Tp57577_TGAC_v2_gene26671 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_142: 64367-69366 Trifolium pratense
Tp57577_TGAC_v2_gene26671 10.0kb upstream 10.0kb upstream 13529 true Tp57577_TGAC_v2_scaf_142: 69367-82895 Trifolium pratense
Tp57577_TGAC_v2_gene26671 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_142: 72896-82895 Trifolium pratense
Tp57577_TGAC_v2_gene26671 10.0kb downstream 10.0kb downstream 13529 true Tp57577_TGAC_v2_scaf_142: 59367-72895 Trifolium pratense
Tp57577_TGAC_v2_gene26671 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_142: 59367-69366 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302147 5265 Fabidae View MSA
124068564 5270 Rosid View MSA
123737576 5271 Pentapetalae View MSA
122787976 5272 Eudicot View MSA
122049427 5273 Angiosperm View MSA
121346924 5274 Embryophyte View MSA
123426893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain