Gene : Tp57577_TGAC_v2_gene16535 T. pratense v2
Defline:  (1 of 3) PTHR10165:SF80 - LIPID PHOSPHATE PHOSPHATASE 1-RELATED Genomic Order:  10
Name:  ? Tp57577_TGAC_v2_gene16535 Secondary Identifier:  ? PAC:35962095
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRIGLSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16535 0.5kb upstream 0.5kb upstream 9249 true Tp57577_TGAC_v2_scaf_265: 68426-77674 Trifolium pratense
Tp57577_TGAC_v2_gene16535 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_265: 68426-68925 Trifolium pratense
Tp57577_TGAC_v2_gene16535 0.5kb downstream 0.5kb downstream 9249 true Tp57577_TGAC_v2_scaf_265: 68926-78174 Trifolium pratense
Tp57577_TGAC_v2_gene16535 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_265: 77675-78174 Trifolium pratense
Tp57577_TGAC_v2_gene16535 1.0kb upstream 1.0kb upstream 9749 true Tp57577_TGAC_v2_scaf_265: 67926-77674 Trifolium pratense
Tp57577_TGAC_v2_gene16535 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_265: 67926-68925 Trifolium pratense
Tp57577_TGAC_v2_gene16535 1.0kb downstream 1.0kb downstream 9749 true Tp57577_TGAC_v2_scaf_265: 68926-78674 Trifolium pratense
Tp57577_TGAC_v2_gene16535 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_265: 77675-78674 Trifolium pratense
Tp57577_TGAC_v2_gene16535 2.0kb upstream 2.0kb upstream 10749 true Tp57577_TGAC_v2_scaf_265: 66926-77674 Trifolium pratense
Tp57577_TGAC_v2_gene16535 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_265: 66926-68925 Trifolium pratense
Tp57577_TGAC_v2_gene16535 2.0kb downstream 2.0kb downstream 10749 true Tp57577_TGAC_v2_scaf_265: 68926-79674 Trifolium pratense
Tp57577_TGAC_v2_gene16535 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_265: 77675-79674 Trifolium pratense
Tp57577_TGAC_v2_gene16535 5.0kb upstream 5.0kb upstream 13749 true Tp57577_TGAC_v2_scaf_265: 63926-77674 Trifolium pratense
Tp57577_TGAC_v2_gene16535 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_265: 63926-68925 Trifolium pratense
Tp57577_TGAC_v2_gene16535 5.0kb downstream 5.0kb downstream 13749 true Tp57577_TGAC_v2_scaf_265: 68926-82674 Trifolium pratense
Tp57577_TGAC_v2_gene16535 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_265: 77675-82674 Trifolium pratense
Tp57577_TGAC_v2_gene16535 10.0kb upstream 10.0kb upstream 18749 true Tp57577_TGAC_v2_scaf_265: 58926-77674 Trifolium pratense
Tp57577_TGAC_v2_gene16535 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_265: 58926-68925 Trifolium pratense
Tp57577_TGAC_v2_gene16535 10.0kb downstream 10.0kb downstream 18749 true Tp57577_TGAC_v2_scaf_265: 68926-87674 Trifolium pratense
Tp57577_TGAC_v2_gene16535 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_265: 77675-87674 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314328 5265 Fabidae View MSA
124074068 5270 Rosid View MSA
123752776 5271 Pentapetalae View MSA
122787523 5272 Eudicot View MSA
122042575 5273 Angiosperm View MSA
121350600 5274 Embryophyte View MSA
123428329 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain