Gene : Tp57577_TGAC_v2_gene39598 T. pratense v2
Defline:  (1 of 2) PTHR10992:SF731 - HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene39598 Secondary Identifier:  ? PAC:35954501
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense LIPAS-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene39598 0.5kb upstream 0.5kb upstream 2208 true Tp57577_TGAC_v2_scaf_5176: 333-2540 Trifolium pratense
Tp57577_TGAC_v2_gene39598 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_5176: 333-832 Trifolium pratense
Tp57577_TGAC_v2_gene39598 0.5kb downstream 0.5kb downstream 1778 true Tp57577_TGAC_v2_scaf_5176: 833-2610 Trifolium pratense
Tp57577_TGAC_v2_gene39598 0.5kb downstream 0.5kb downstream 70 false Tp57577_TGAC_v2_scaf_5176: 2541-2610 Trifolium pratense
Tp57577_TGAC_v2_gene39598 1.0kb upstream 1.0kb upstream 2540 true Tp57577_TGAC_v2_scaf_5176: 1-2540 Trifolium pratense
Tp57577_TGAC_v2_gene39598 1.0kb upstream 1.0kb upstream 832 false Tp57577_TGAC_v2_scaf_5176: 1-832 Trifolium pratense
Tp57577_TGAC_v2_gene39598 1.0kb downstream 1.0kb downstream 1778 true Tp57577_TGAC_v2_scaf_5176: 833-2610 Trifolium pratense
Tp57577_TGAC_v2_gene39598 1.0kb downstream 1.0kb downstream 70 false Tp57577_TGAC_v2_scaf_5176: 2541-2610 Trifolium pratense
Tp57577_TGAC_v2_gene39598 2.0kb upstream 2.0kb upstream 2540 true Tp57577_TGAC_v2_scaf_5176: 1-2540 Trifolium pratense
Tp57577_TGAC_v2_gene39598 2.0kb upstream 2.0kb upstream 832 false Tp57577_TGAC_v2_scaf_5176: 1-832 Trifolium pratense
Tp57577_TGAC_v2_gene39598 2.0kb downstream 2.0kb downstream 1778 true Tp57577_TGAC_v2_scaf_5176: 833-2610 Trifolium pratense
Tp57577_TGAC_v2_gene39598 2.0kb downstream 2.0kb downstream 70 false Tp57577_TGAC_v2_scaf_5176: 2541-2610 Trifolium pratense
Tp57577_TGAC_v2_gene39598 5.0kb upstream 5.0kb upstream 2540 true Tp57577_TGAC_v2_scaf_5176: 1-2540 Trifolium pratense
Tp57577_TGAC_v2_gene39598 5.0kb upstream 5.0kb upstream 832 false Tp57577_TGAC_v2_scaf_5176: 1-832 Trifolium pratense
Tp57577_TGAC_v2_gene39598 5.0kb downstream 5.0kb downstream 1778 true Tp57577_TGAC_v2_scaf_5176: 833-2610 Trifolium pratense
Tp57577_TGAC_v2_gene39598 5.0kb downstream 5.0kb downstream 70 false Tp57577_TGAC_v2_scaf_5176: 2541-2610 Trifolium pratense
Tp57577_TGAC_v2_gene39598 10.0kb upstream 10.0kb upstream 2540 true Tp57577_TGAC_v2_scaf_5176: 1-2540 Trifolium pratense
Tp57577_TGAC_v2_gene39598 10.0kb upstream 10.0kb upstream 832 false Tp57577_TGAC_v2_scaf_5176: 1-832 Trifolium pratense
Tp57577_TGAC_v2_gene39598 10.0kb downstream 10.0kb downstream 1778 true Tp57577_TGAC_v2_scaf_5176: 833-2610 Trifolium pratense
Tp57577_TGAC_v2_gene39598 10.0kb downstream 10.0kb downstream 70 false Tp57577_TGAC_v2_scaf_5176: 2541-2610 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307193 5265 Fabidae View MSA
124060588 5270 Rosid View MSA
123737502 5271 Pentapetalae View MSA
122795240 5272 Eudicot View MSA
122044189 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain