Gene : Tp57577_TGAC_v2_gene10614 T. pratense v2
Defline:  (1 of 2) 2.7.8.7 - Holo-[acyl-carrier-protein] synthase / PPTase Genomic Order:  18
Name:  ? Tp57577_TGAC_v2_gene10614 Secondary Identifier:  ? PAC:35992452
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6012-1 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene10614 0.5kb upstream 0.5kb upstream 6226 true Tp57577_TGAC_v2_scaf_214: 157790-164015 Trifolium pratense
Tp57577_TGAC_v2_gene10614 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_214: 163516-164015 Trifolium pratense
Tp57577_TGAC_v2_gene10614 0.5kb downstream 0.5kb downstream 6226 true Tp57577_TGAC_v2_scaf_214: 157290-163515 Trifolium pratense
Tp57577_TGAC_v2_gene10614 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_214: 157290-157789 Trifolium pratense
Tp57577_TGAC_v2_gene10614 1.0kb upstream 1.0kb upstream 6726 true Tp57577_TGAC_v2_scaf_214: 157790-164515 Trifolium pratense
Tp57577_TGAC_v2_gene10614 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_214: 163516-164515 Trifolium pratense
Tp57577_TGAC_v2_gene10614 1.0kb downstream 1.0kb downstream 6726 true Tp57577_TGAC_v2_scaf_214: 156790-163515 Trifolium pratense
Tp57577_TGAC_v2_gene10614 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_214: 156790-157789 Trifolium pratense
Tp57577_TGAC_v2_gene10614 2.0kb upstream 2.0kb upstream 7726 true Tp57577_TGAC_v2_scaf_214: 157790-165515 Trifolium pratense
Tp57577_TGAC_v2_gene10614 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_214: 163516-165515 Trifolium pratense
Tp57577_TGAC_v2_gene10614 2.0kb downstream 2.0kb downstream 7726 true Tp57577_TGAC_v2_scaf_214: 155790-163515 Trifolium pratense
Tp57577_TGAC_v2_gene10614 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_214: 155790-157789 Trifolium pratense
Tp57577_TGAC_v2_gene10614 5.0kb upstream 5.0kb upstream 10726 true Tp57577_TGAC_v2_scaf_214: 157790-168515 Trifolium pratense
Tp57577_TGAC_v2_gene10614 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_214: 163516-168515 Trifolium pratense
Tp57577_TGAC_v2_gene10614 5.0kb downstream 5.0kb downstream 10726 true Tp57577_TGAC_v2_scaf_214: 152790-163515 Trifolium pratense
Tp57577_TGAC_v2_gene10614 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_214: 152790-157789 Trifolium pratense
Tp57577_TGAC_v2_gene10614 10.0kb upstream 10.0kb upstream 15726 true Tp57577_TGAC_v2_scaf_214: 157790-173515 Trifolium pratense
Tp57577_TGAC_v2_gene10614 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_214: 163516-173515 Trifolium pratense
Tp57577_TGAC_v2_gene10614 10.0kb downstream 10.0kb downstream 15726 true Tp57577_TGAC_v2_scaf_214: 147790-163515 Trifolium pratense
Tp57577_TGAC_v2_gene10614 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_214: 147790-157789 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307205 5265 Fabidae View MSA
124070167 5270 Rosid View MSA
123742618 5271 Pentapetalae View MSA
122794385 5272 Eudicot View MSA
122048448 5273 Angiosperm View MSA
123429078 5275 Viridiplantae View MSA
121348212 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain