Gene : Tp57577_TGAC_v2_gene15143 T. pratense v2
Defline:  (1 of 2) K04485 - DNA repair protein RadA/Sms (sms, radA) Genomic Order:  9
Name:  ? Tp57577_TGAC_v2_gene15143 Secondary Identifier:  ? PAC:35985377
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene15143 0.5kb upstream 0.5kb upstream 8134 true Tp57577_TGAC_v2_scaf_572: 88756-96889 Trifolium pratense
Tp57577_TGAC_v2_gene15143 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_572: 88756-89255 Trifolium pratense
Tp57577_TGAC_v2_gene15143 0.5kb downstream 0.5kb downstream 8134 true Tp57577_TGAC_v2_scaf_572: 89256-97389 Trifolium pratense
Tp57577_TGAC_v2_gene15143 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_572: 96890-97389 Trifolium pratense
Tp57577_TGAC_v2_gene15143 1.0kb upstream 1.0kb upstream 8634 true Tp57577_TGAC_v2_scaf_572: 88256-96889 Trifolium pratense
Tp57577_TGAC_v2_gene15143 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_572: 88256-89255 Trifolium pratense
Tp57577_TGAC_v2_gene15143 1.0kb downstream 1.0kb downstream 8634 true Tp57577_TGAC_v2_scaf_572: 89256-97889 Trifolium pratense
Tp57577_TGAC_v2_gene15143 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_572: 96890-97889 Trifolium pratense
Tp57577_TGAC_v2_gene15143 2.0kb upstream 2.0kb upstream 9634 true Tp57577_TGAC_v2_scaf_572: 87256-96889 Trifolium pratense
Tp57577_TGAC_v2_gene15143 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_572: 87256-89255 Trifolium pratense
Tp57577_TGAC_v2_gene15143 2.0kb downstream 2.0kb downstream 9634 true Tp57577_TGAC_v2_scaf_572: 89256-98889 Trifolium pratense
Tp57577_TGAC_v2_gene15143 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_572: 96890-98889 Trifolium pratense
Tp57577_TGAC_v2_gene15143 5.0kb upstream 5.0kb upstream 12634 true Tp57577_TGAC_v2_scaf_572: 84256-96889 Trifolium pratense
Tp57577_TGAC_v2_gene15143 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_572: 84256-89255 Trifolium pratense
Tp57577_TGAC_v2_gene15143 5.0kb downstream 5.0kb downstream 12634 true Tp57577_TGAC_v2_scaf_572: 89256-101889 Trifolium pratense
Tp57577_TGAC_v2_gene15143 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_572: 96890-101889 Trifolium pratense
Tp57577_TGAC_v2_gene15143 10.0kb upstream 10.0kb upstream 17634 true Tp57577_TGAC_v2_scaf_572: 79256-96889 Trifolium pratense
Tp57577_TGAC_v2_gene15143 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_572: 79256-89255 Trifolium pratense
Tp57577_TGAC_v2_gene15143 10.0kb downstream 10.0kb downstream 17634 true Tp57577_TGAC_v2_scaf_572: 89256-106889 Trifolium pratense
Tp57577_TGAC_v2_gene15143 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_572: 96890-106889 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299579 5265 Fabidae View MSA
124061161 5270 Rosid View MSA
123738270 5271 Pentapetalae View MSA
122793264 5272 Eudicot View MSA
122043621 5273 Angiosperm View MSA
121346798 5274 Embryophyte View MSA
123426216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain