Gene : Tp57577_TGAC_v2_gene26087 T. pratense v2
Defline:  (1 of 1) 1.13.11.53 - Acireductone dioxygenase (Ni(2+)-requiring) / E-2 Genomic Order:  27
Name:  ? Tp57577_TGAC_v2_gene26087 Secondary Identifier:  ? PAC:35976802
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-4361 Trifolium pratense pathologic  
Tpratense PWY-5389 Trifolium pratense pathologic  
Tpratense PWY-7270 Trifolium pratense pathologic  
Tpratense PWY-7528 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene26087 0.5kb upstream 0.5kb upstream 3492 true Tp57577_TGAC_v2_scaf_153: 236546-240037 Trifolium pratense
Tp57577_TGAC_v2_gene26087 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_153: 236546-237045 Trifolium pratense
Tp57577_TGAC_v2_gene26087 0.5kb downstream 0.5kb downstream 3492 true Tp57577_TGAC_v2_scaf_153: 237046-240537 Trifolium pratense
Tp57577_TGAC_v2_gene26087 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_153: 240038-240537 Trifolium pratense
Tp57577_TGAC_v2_gene26087 1.0kb upstream 1.0kb upstream 3992 true Tp57577_TGAC_v2_scaf_153: 236046-240037 Trifolium pratense
Tp57577_TGAC_v2_gene26087 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_153: 236046-237045 Trifolium pratense
Tp57577_TGAC_v2_gene26087 1.0kb downstream 1.0kb downstream 3992 true Tp57577_TGAC_v2_scaf_153: 237046-241037 Trifolium pratense
Tp57577_TGAC_v2_gene26087 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_153: 240038-241037 Trifolium pratense
Tp57577_TGAC_v2_gene26087 2.0kb upstream 2.0kb upstream 4992 true Tp57577_TGAC_v2_scaf_153: 235046-240037 Trifolium pratense
Tp57577_TGAC_v2_gene26087 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_153: 235046-237045 Trifolium pratense
Tp57577_TGAC_v2_gene26087 2.0kb downstream 2.0kb downstream 4992 true Tp57577_TGAC_v2_scaf_153: 237046-242037 Trifolium pratense
Tp57577_TGAC_v2_gene26087 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_153: 240038-242037 Trifolium pratense
Tp57577_TGAC_v2_gene26087 5.0kb upstream 5.0kb upstream 7992 true Tp57577_TGAC_v2_scaf_153: 232046-240037 Trifolium pratense
Tp57577_TGAC_v2_gene26087 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_153: 232046-237045 Trifolium pratense
Tp57577_TGAC_v2_gene26087 5.0kb downstream 5.0kb downstream 7992 true Tp57577_TGAC_v2_scaf_153: 237046-245037 Trifolium pratense
Tp57577_TGAC_v2_gene26087 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_153: 240038-245037 Trifolium pratense
Tp57577_TGAC_v2_gene26087 10.0kb upstream 10.0kb upstream 12992 true Tp57577_TGAC_v2_scaf_153: 227046-240037 Trifolium pratense
Tp57577_TGAC_v2_gene26087 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_153: 227046-237045 Trifolium pratense
Tp57577_TGAC_v2_gene26087 10.0kb downstream 10.0kb downstream 12992 true Tp57577_TGAC_v2_scaf_153: 237046-250037 Trifolium pratense
Tp57577_TGAC_v2_gene26087 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_153: 240038-250037 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312275 5265 Fabidae View MSA
124070123 5270 Rosid View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain