Gene : Tp57577_TGAC_v2_gene39370 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene39370 Secondary Identifier:  ? PAC:35985982
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene39370 0.5kb upstream 0.5kb upstream 1299 true Tp57577_TGAC_v2_scaf_14814: 195-1493 Trifolium pratense
Tp57577_TGAC_v2_gene39370 0.5kb upstream 0.5kb upstream 1 false Tp57577_TGAC_v2_scaf_14814: 1493-1493 Trifolium pratense
Tp57577_TGAC_v2_gene39370 0.5kb downstream 0.5kb downstream 1492 true Tp57577_TGAC_v2_scaf_14814: 1-1492 Trifolium pratense
Tp57577_TGAC_v2_gene39370 0.5kb downstream 0.5kb downstream 194 false Tp57577_TGAC_v2_scaf_14814: 1-194 Trifolium pratense
Tp57577_TGAC_v2_gene39370 1.0kb upstream 1.0kb upstream 1299 true Tp57577_TGAC_v2_scaf_14814: 195-1493 Trifolium pratense
Tp57577_TGAC_v2_gene39370 1.0kb upstream 1.0kb upstream 1 false Tp57577_TGAC_v2_scaf_14814: 1493-1493 Trifolium pratense
Tp57577_TGAC_v2_gene39370 1.0kb downstream 1.0kb downstream 1492 true Tp57577_TGAC_v2_scaf_14814: 1-1492 Trifolium pratense
Tp57577_TGAC_v2_gene39370 1.0kb downstream 1.0kb downstream 194 false Tp57577_TGAC_v2_scaf_14814: 1-194 Trifolium pratense
Tp57577_TGAC_v2_gene39370 2.0kb upstream 2.0kb upstream 1299 true Tp57577_TGAC_v2_scaf_14814: 195-1493 Trifolium pratense
Tp57577_TGAC_v2_gene39370 2.0kb upstream 2.0kb upstream 1 false Tp57577_TGAC_v2_scaf_14814: 1493-1493 Trifolium pratense
Tp57577_TGAC_v2_gene39370 2.0kb downstream 2.0kb downstream 1492 true Tp57577_TGAC_v2_scaf_14814: 1-1492 Trifolium pratense
Tp57577_TGAC_v2_gene39370 2.0kb downstream 2.0kb downstream 194 false Tp57577_TGAC_v2_scaf_14814: 1-194 Trifolium pratense
Tp57577_TGAC_v2_gene39370 5.0kb upstream 5.0kb upstream 1299 true Tp57577_TGAC_v2_scaf_14814: 195-1493 Trifolium pratense
Tp57577_TGAC_v2_gene39370 5.0kb upstream 5.0kb upstream 1 false Tp57577_TGAC_v2_scaf_14814: 1493-1493 Trifolium pratense
Tp57577_TGAC_v2_gene39370 5.0kb downstream 5.0kb downstream 1492 true Tp57577_TGAC_v2_scaf_14814: 1-1492 Trifolium pratense
Tp57577_TGAC_v2_gene39370 5.0kb downstream 5.0kb downstream 194 false Tp57577_TGAC_v2_scaf_14814: 1-194 Trifolium pratense
Tp57577_TGAC_v2_gene39370 10.0kb upstream 10.0kb upstream 1299 true Tp57577_TGAC_v2_scaf_14814: 195-1493 Trifolium pratense
Tp57577_TGAC_v2_gene39370 10.0kb upstream 10.0kb upstream 1 false Tp57577_TGAC_v2_scaf_14814: 1493-1493 Trifolium pratense
Tp57577_TGAC_v2_gene39370 10.0kb downstream 10.0kb downstream 1492 true Tp57577_TGAC_v2_scaf_14814: 1-1492 Trifolium pratense
Tp57577_TGAC_v2_gene39370 10.0kb downstream 10.0kb downstream 194 false Tp57577_TGAC_v2_scaf_14814: 1-194 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027219 5273 Angiosperm View MSA
122296354 5265 Fabidae View MSA
124037694 5270 Rosid View MSA
123745654 5271 Pentapetalae View MSA
122794629 5272 Eudicot View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain