Gene : Tp57577_TGAC_v2_gene16508 T. pratense v2
Defline:  (1 of 44) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  1723
Name:  ? Tp57577_TGAC_v2_gene16508 Secondary Identifier:  ? PAC:35970026
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16508 0.5kb upstream 0.5kb upstream 6139 true Tp57577_TGAC_v2_LG2: 16563401-16569539 Trifolium pratense
Tp57577_TGAC_v2_gene16508 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 16569040-16569539 Trifolium pratense
Tp57577_TGAC_v2_gene16508 0.5kb downstream 0.5kb downstream 6139 true Tp57577_TGAC_v2_LG2: 16562901-16569039 Trifolium pratense
Tp57577_TGAC_v2_gene16508 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 16562901-16563400 Trifolium pratense
Tp57577_TGAC_v2_gene16508 1.0kb upstream 1.0kb upstream 6639 true Tp57577_TGAC_v2_LG2: 16563401-16570039 Trifolium pratense
Tp57577_TGAC_v2_gene16508 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 16569040-16570039 Trifolium pratense
Tp57577_TGAC_v2_gene16508 1.0kb downstream 1.0kb downstream 6639 true Tp57577_TGAC_v2_LG2: 16562401-16569039 Trifolium pratense
Tp57577_TGAC_v2_gene16508 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 16562401-16563400 Trifolium pratense
Tp57577_TGAC_v2_gene16508 2.0kb upstream 2.0kb upstream 7639 true Tp57577_TGAC_v2_LG2: 16563401-16571039 Trifolium pratense
Tp57577_TGAC_v2_gene16508 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 16569040-16571039 Trifolium pratense
Tp57577_TGAC_v2_gene16508 2.0kb downstream 2.0kb downstream 7639 true Tp57577_TGAC_v2_LG2: 16561401-16569039 Trifolium pratense
Tp57577_TGAC_v2_gene16508 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 16561401-16563400 Trifolium pratense
Tp57577_TGAC_v2_gene16508 5.0kb upstream 5.0kb upstream 10639 true Tp57577_TGAC_v2_LG2: 16563401-16574039 Trifolium pratense
Tp57577_TGAC_v2_gene16508 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 16569040-16574039 Trifolium pratense
Tp57577_TGAC_v2_gene16508 5.0kb downstream 5.0kb downstream 10639 true Tp57577_TGAC_v2_LG2: 16558401-16569039 Trifolium pratense
Tp57577_TGAC_v2_gene16508 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 16558401-16563400 Trifolium pratense
Tp57577_TGAC_v2_gene16508 10.0kb upstream 10.0kb upstream 15639 true Tp57577_TGAC_v2_LG2: 16563401-16579039 Trifolium pratense
Tp57577_TGAC_v2_gene16508 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 16569040-16579039 Trifolium pratense
Tp57577_TGAC_v2_gene16508 10.0kb downstream 10.0kb downstream 15639 true Tp57577_TGAC_v2_LG2: 16553401-16569039 Trifolium pratense
Tp57577_TGAC_v2_gene16508 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 16553401-16563400 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304638 5265 Fabidae View MSA
124062479 5270 Rosid View MSA
123743677 5271 Pentapetalae View MSA
122786281 5272 Eudicot View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain