Gene : Tp57577_TGAC_v2_gene38051 T. pratense v2
Defline:  (1 of 39) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  3607
Name:  ? Tp57577_TGAC_v2_gene38051 Secondary Identifier:  ? PAC:35970309
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38051 0.5kb upstream 0.5kb upstream 1856 true Tp57577_TGAC_v2_LG2: 31777490-31779345 Trifolium pratense
Tp57577_TGAC_v2_gene38051 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 31778846-31779345 Trifolium pratense
Tp57577_TGAC_v2_gene38051 0.5kb downstream 0.5kb downstream 1856 true Tp57577_TGAC_v2_LG2: 31776990-31778845 Trifolium pratense
Tp57577_TGAC_v2_gene38051 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 31776990-31777489 Trifolium pratense
Tp57577_TGAC_v2_gene38051 1.0kb upstream 1.0kb upstream 2356 true Tp57577_TGAC_v2_LG2: 31777490-31779845 Trifolium pratense
Tp57577_TGAC_v2_gene38051 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 31778846-31779845 Trifolium pratense
Tp57577_TGAC_v2_gene38051 1.0kb downstream 1.0kb downstream 2356 true Tp57577_TGAC_v2_LG2: 31776490-31778845 Trifolium pratense
Tp57577_TGAC_v2_gene38051 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 31776490-31777489 Trifolium pratense
Tp57577_TGAC_v2_gene38051 2.0kb upstream 2.0kb upstream 3356 true Tp57577_TGAC_v2_LG2: 31777490-31780845 Trifolium pratense
Tp57577_TGAC_v2_gene38051 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 31778846-31780845 Trifolium pratense
Tp57577_TGAC_v2_gene38051 2.0kb downstream 2.0kb downstream 3356 true Tp57577_TGAC_v2_LG2: 31775490-31778845 Trifolium pratense
Tp57577_TGAC_v2_gene38051 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 31775490-31777489 Trifolium pratense
Tp57577_TGAC_v2_gene38051 5.0kb upstream 5.0kb upstream 6356 true Tp57577_TGAC_v2_LG2: 31777490-31783845 Trifolium pratense
Tp57577_TGAC_v2_gene38051 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 31778846-31783845 Trifolium pratense
Tp57577_TGAC_v2_gene38051 5.0kb downstream 5.0kb downstream 6356 true Tp57577_TGAC_v2_LG2: 31772490-31778845 Trifolium pratense
Tp57577_TGAC_v2_gene38051 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 31772490-31777489 Trifolium pratense
Tp57577_TGAC_v2_gene38051 10.0kb upstream 10.0kb upstream 11356 true Tp57577_TGAC_v2_LG2: 31777490-31788845 Trifolium pratense
Tp57577_TGAC_v2_gene38051 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 31778846-31788845 Trifolium pratense
Tp57577_TGAC_v2_gene38051 10.0kb downstream 10.0kb downstream 11356 true Tp57577_TGAC_v2_LG2: 31767490-31778845 Trifolium pratense
Tp57577_TGAC_v2_gene38051 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 31767490-31777489 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315244 5265 Fabidae View MSA
124064025 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain