Gene : Tp57577_TGAC_v2_gene19235 T. pratense v2
Defline:  (1 of 1) KOG2307 - Low density lipoprotein receptor Genomic Order:  34
Name:  ? Tp57577_TGAC_v2_gene19235 Secondary Identifier:  ? PAC:35986578
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19235 0.5kb upstream 0.5kb upstream 5161 true Tp57577_TGAC_v2_scaf_345: 244747-249907 Trifolium pratense
Tp57577_TGAC_v2_gene19235 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_345: 244747-245246 Trifolium pratense
Tp57577_TGAC_v2_gene19235 0.5kb downstream 0.5kb downstream 4761 true Tp57577_TGAC_v2_scaf_345: 245247-250007 Trifolium pratense
Tp57577_TGAC_v2_gene19235 0.5kb downstream 0.5kb downstream 100 false Tp57577_TGAC_v2_scaf_345: 249908-250007 Trifolium pratense
Tp57577_TGAC_v2_gene19235 1.0kb upstream 1.0kb upstream 5661 true Tp57577_TGAC_v2_scaf_345: 244247-249907 Trifolium pratense
Tp57577_TGAC_v2_gene19235 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_345: 244247-245246 Trifolium pratense
Tp57577_TGAC_v2_gene19235 1.0kb downstream 1.0kb downstream 4761 true Tp57577_TGAC_v2_scaf_345: 245247-250007 Trifolium pratense
Tp57577_TGAC_v2_gene19235 1.0kb downstream 1.0kb downstream 100 false Tp57577_TGAC_v2_scaf_345: 249908-250007 Trifolium pratense
Tp57577_TGAC_v2_gene19235 2.0kb upstream 2.0kb upstream 6661 true Tp57577_TGAC_v2_scaf_345: 243247-249907 Trifolium pratense
Tp57577_TGAC_v2_gene19235 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_345: 243247-245246 Trifolium pratense
Tp57577_TGAC_v2_gene19235 2.0kb downstream 2.0kb downstream 4761 true Tp57577_TGAC_v2_scaf_345: 245247-250007 Trifolium pratense
Tp57577_TGAC_v2_gene19235 2.0kb downstream 2.0kb downstream 100 false Tp57577_TGAC_v2_scaf_345: 249908-250007 Trifolium pratense
Tp57577_TGAC_v2_gene19235 5.0kb upstream 5.0kb upstream 9661 true Tp57577_TGAC_v2_scaf_345: 240247-249907 Trifolium pratense
Tp57577_TGAC_v2_gene19235 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_345: 240247-245246 Trifolium pratense
Tp57577_TGAC_v2_gene19235 5.0kb downstream 5.0kb downstream 4761 true Tp57577_TGAC_v2_scaf_345: 245247-250007 Trifolium pratense
Tp57577_TGAC_v2_gene19235 5.0kb downstream 5.0kb downstream 100 false Tp57577_TGAC_v2_scaf_345: 249908-250007 Trifolium pratense
Tp57577_TGAC_v2_gene19235 10.0kb upstream 10.0kb upstream 14661 true Tp57577_TGAC_v2_scaf_345: 235247-249907 Trifolium pratense
Tp57577_TGAC_v2_gene19235 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_345: 235247-245246 Trifolium pratense
Tp57577_TGAC_v2_gene19235 10.0kb downstream 10.0kb downstream 4761 true Tp57577_TGAC_v2_scaf_345: 245247-250007 Trifolium pratense
Tp57577_TGAC_v2_gene19235 10.0kb downstream 10.0kb downstream 100 false Tp57577_TGAC_v2_scaf_345: 249908-250007 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303387 5265 Fabidae View MSA
124060440 5270 Rosid View MSA
123737600 5271 Pentapetalae View MSA
122792763 5272 Eudicot View MSA
122042143 5273 Angiosperm View MSA
121348897 5274 Embryophyte View MSA
123428033 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain