Gene : Tp57577_TGAC_v2_gene24737 T. pratense v2
Defline:  (1 of 1) PTHR31339:SF3 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  7
Name:  ? Tp57577_TGAC_v2_gene24737 Secondary Identifier:  ? PAC:35960181
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24737 0.5kb upstream 0.5kb upstream 3762 true Tp57577_TGAC_v2_scaf_935: 48474-52235 Trifolium pratense
Tp57577_TGAC_v2_gene24737 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_935: 51736-52235 Trifolium pratense
Tp57577_TGAC_v2_gene24737 0.5kb downstream 0.5kb downstream 3762 true Tp57577_TGAC_v2_scaf_935: 47974-51735 Trifolium pratense
Tp57577_TGAC_v2_gene24737 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_935: 47974-48473 Trifolium pratense
Tp57577_TGAC_v2_gene24737 1.0kb upstream 1.0kb upstream 4262 true Tp57577_TGAC_v2_scaf_935: 48474-52735 Trifolium pratense
Tp57577_TGAC_v2_gene24737 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_935: 51736-52735 Trifolium pratense
Tp57577_TGAC_v2_gene24737 1.0kb downstream 1.0kb downstream 4262 true Tp57577_TGAC_v2_scaf_935: 47474-51735 Trifolium pratense
Tp57577_TGAC_v2_gene24737 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_935: 47474-48473 Trifolium pratense
Tp57577_TGAC_v2_gene24737 2.0kb upstream 2.0kb upstream 5262 true Tp57577_TGAC_v2_scaf_935: 48474-53735 Trifolium pratense
Tp57577_TGAC_v2_gene24737 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_935: 51736-53735 Trifolium pratense
Tp57577_TGAC_v2_gene24737 2.0kb downstream 2.0kb downstream 5262 true Tp57577_TGAC_v2_scaf_935: 46474-51735 Trifolium pratense
Tp57577_TGAC_v2_gene24737 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_935: 46474-48473 Trifolium pratense
Tp57577_TGAC_v2_gene24737 5.0kb upstream 5.0kb upstream 8262 true Tp57577_TGAC_v2_scaf_935: 48474-56735 Trifolium pratense
Tp57577_TGAC_v2_gene24737 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_935: 51736-56735 Trifolium pratense
Tp57577_TGAC_v2_gene24737 5.0kb downstream 5.0kb downstream 8262 true Tp57577_TGAC_v2_scaf_935: 43474-51735 Trifolium pratense
Tp57577_TGAC_v2_gene24737 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_935: 43474-48473 Trifolium pratense
Tp57577_TGAC_v2_gene24737 10.0kb upstream 10.0kb upstream 13262 true Tp57577_TGAC_v2_scaf_935: 48474-61735 Trifolium pratense
Tp57577_TGAC_v2_gene24737 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_935: 51736-61735 Trifolium pratense
Tp57577_TGAC_v2_gene24737 10.0kb downstream 10.0kb downstream 13262 true Tp57577_TGAC_v2_scaf_935: 38474-51735 Trifolium pratense
Tp57577_TGAC_v2_gene24737 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_935: 38474-48473 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309938 5265 Fabidae View MSA
124068790 5270 Rosid View MSA
123750748 5271 Pentapetalae View MSA
122786730 5272 Eudicot View MSA
122043550 5273 Angiosperm View MSA
121310146 5274 Embryophyte View MSA
123347715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain