Gene : Tp57577_TGAC_v2_gene4271 T. pratense v2
Defline:  (1 of 4) 1.1.2.6 - Polyvinyl alcohol dehydrogenase (cytochrome) / PVADH Genomic Order:  78
Name:  ? Tp57577_TGAC_v2_gene4271 Secondary Identifier:  ? PAC:35960504
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-6464 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene4271 0.5kb upstream 0.5kb upstream 4901 true Tp57577_TGAC_v2_scaf_34: 661045-665945 Trifolium pratense
Tp57577_TGAC_v2_gene4271 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_34: 665446-665945 Trifolium pratense
Tp57577_TGAC_v2_gene4271 0.5kb downstream 0.5kb downstream 4901 true Tp57577_TGAC_v2_scaf_34: 660545-665445 Trifolium pratense
Tp57577_TGAC_v2_gene4271 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_34: 660545-661044 Trifolium pratense
Tp57577_TGAC_v2_gene4271 1.0kb upstream 1.0kb upstream 5401 true Tp57577_TGAC_v2_scaf_34: 661045-666445 Trifolium pratense
Tp57577_TGAC_v2_gene4271 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_34: 665446-666445 Trifolium pratense
Tp57577_TGAC_v2_gene4271 1.0kb downstream 1.0kb downstream 5401 true Tp57577_TGAC_v2_scaf_34: 660045-665445 Trifolium pratense
Tp57577_TGAC_v2_gene4271 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_34: 660045-661044 Trifolium pratense
Tp57577_TGAC_v2_gene4271 2.0kb upstream 2.0kb upstream 6401 true Tp57577_TGAC_v2_scaf_34: 661045-667445 Trifolium pratense
Tp57577_TGAC_v2_gene4271 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_34: 665446-667445 Trifolium pratense
Tp57577_TGAC_v2_gene4271 2.0kb downstream 2.0kb downstream 6401 true Tp57577_TGAC_v2_scaf_34: 659045-665445 Trifolium pratense
Tp57577_TGAC_v2_gene4271 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_34: 659045-661044 Trifolium pratense
Tp57577_TGAC_v2_gene4271 5.0kb upstream 5.0kb upstream 9401 true Tp57577_TGAC_v2_scaf_34: 661045-670445 Trifolium pratense
Tp57577_TGAC_v2_gene4271 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_34: 665446-670445 Trifolium pratense
Tp57577_TGAC_v2_gene4271 5.0kb downstream 5.0kb downstream 9401 true Tp57577_TGAC_v2_scaf_34: 656045-665445 Trifolium pratense
Tp57577_TGAC_v2_gene4271 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_34: 656045-661044 Trifolium pratense
Tp57577_TGAC_v2_gene4271 10.0kb upstream 10.0kb upstream 14401 true Tp57577_TGAC_v2_scaf_34: 661045-675445 Trifolium pratense
Tp57577_TGAC_v2_gene4271 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_34: 665446-675445 Trifolium pratense
Tp57577_TGAC_v2_gene4271 10.0kb downstream 10.0kb downstream 14401 true Tp57577_TGAC_v2_scaf_34: 651045-665445 Trifolium pratense
Tp57577_TGAC_v2_gene4271 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_34: 651045-661044 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792221 5273 Angiosperm View MSA
122311938 5265 Fabidae View MSA
124071700 5270 Rosid View MSA
123753626 5271 Pentapetalae View MSA
122797018 5272 Eudicot View MSA
121349158 5274 Embryophyte View MSA
123425868 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain