Gene : Tp57577_TGAC_v2_gene13421 T. pratense v2
Defline:  (1 of 2) PTHR22942:SF1 - MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG Genomic Order:  12
Name:  ? Tp57577_TGAC_v2_gene13421 Secondary Identifier:  ? PAC:35990940
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13421 0.5kb upstream 0.5kb upstream 5979 true Tp57577_TGAC_v2_scaf_400: 103307-109285 Trifolium pratense
Tp57577_TGAC_v2_gene13421 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_400: 108786-109285 Trifolium pratense
Tp57577_TGAC_v2_gene13421 0.5kb downstream 0.5kb downstream 5979 true Tp57577_TGAC_v2_scaf_400: 102807-108785 Trifolium pratense
Tp57577_TGAC_v2_gene13421 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_400: 102807-103306 Trifolium pratense
Tp57577_TGAC_v2_gene13421 1.0kb upstream 1.0kb upstream 6479 true Tp57577_TGAC_v2_scaf_400: 103307-109785 Trifolium pratense
Tp57577_TGAC_v2_gene13421 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_400: 108786-109785 Trifolium pratense
Tp57577_TGAC_v2_gene13421 1.0kb downstream 1.0kb downstream 6479 true Tp57577_TGAC_v2_scaf_400: 102307-108785 Trifolium pratense
Tp57577_TGAC_v2_gene13421 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_400: 102307-103306 Trifolium pratense
Tp57577_TGAC_v2_gene13421 2.0kb upstream 2.0kb upstream 7479 true Tp57577_TGAC_v2_scaf_400: 103307-110785 Trifolium pratense
Tp57577_TGAC_v2_gene13421 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_400: 108786-110785 Trifolium pratense
Tp57577_TGAC_v2_gene13421 2.0kb downstream 2.0kb downstream 7479 true Tp57577_TGAC_v2_scaf_400: 101307-108785 Trifolium pratense
Tp57577_TGAC_v2_gene13421 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_400: 101307-103306 Trifolium pratense
Tp57577_TGAC_v2_gene13421 5.0kb upstream 5.0kb upstream 10479 true Tp57577_TGAC_v2_scaf_400: 103307-113785 Trifolium pratense
Tp57577_TGAC_v2_gene13421 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_400: 108786-113785 Trifolium pratense
Tp57577_TGAC_v2_gene13421 5.0kb downstream 5.0kb downstream 10479 true Tp57577_TGAC_v2_scaf_400: 98307-108785 Trifolium pratense
Tp57577_TGAC_v2_gene13421 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_400: 98307-103306 Trifolium pratense
Tp57577_TGAC_v2_gene13421 10.0kb upstream 10.0kb upstream 15479 true Tp57577_TGAC_v2_scaf_400: 103307-118785 Trifolium pratense
Tp57577_TGAC_v2_gene13421 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_400: 108786-118785 Trifolium pratense
Tp57577_TGAC_v2_gene13421 10.0kb downstream 10.0kb downstream 15479 true Tp57577_TGAC_v2_scaf_400: 93307-108785 Trifolium pratense
Tp57577_TGAC_v2_gene13421 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_400: 93307-103306 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297351 5265 Fabidae View MSA
124060910 5270 Rosid View MSA
123743404 5271 Pentapetalae View MSA
122790818 5272 Eudicot View MSA
122045748 5273 Angiosperm View MSA
121351318 5274 Embryophyte View MSA
123382118 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain