Gene : Tp57577_TGAC_v2_gene24854 T. pratense v2
Defline:  (1 of 1) PTHR12169:SF6 - LACTATION ELEVATED PROTEIN 1 Genomic Order:  13
Name:  ? Tp57577_TGAC_v2_gene24854 Secondary Identifier:  ? PAC:35986975
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ANAEROFRUCAT-PWY Trifolium pratense pathologic  
Tpratense ANAGLYCOLYSIS-PWY Trifolium pratense pathologic  
Tpratense GLUCOSE1PMETAB-PWY Trifolium pratense pathologic  
Tpratense PWY-621 Trifolium pratense pathologic  
Tpratense PWY-7238 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24854 0.5kb upstream 0.5kb upstream 4737 true Tp57577_TGAC_v2_scaf_171: 79269-84005 Trifolium pratense
Tp57577_TGAC_v2_gene24854 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_171: 83506-84005 Trifolium pratense
Tp57577_TGAC_v2_gene24854 0.5kb downstream 0.5kb downstream 4737 true Tp57577_TGAC_v2_scaf_171: 78769-83505 Trifolium pratense
Tp57577_TGAC_v2_gene24854 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_171: 78769-79268 Trifolium pratense
Tp57577_TGAC_v2_gene24854 1.0kb upstream 1.0kb upstream 5237 true Tp57577_TGAC_v2_scaf_171: 79269-84505 Trifolium pratense
Tp57577_TGAC_v2_gene24854 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_171: 83506-84505 Trifolium pratense
Tp57577_TGAC_v2_gene24854 1.0kb downstream 1.0kb downstream 5237 true Tp57577_TGAC_v2_scaf_171: 78269-83505 Trifolium pratense
Tp57577_TGAC_v2_gene24854 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_171: 78269-79268 Trifolium pratense
Tp57577_TGAC_v2_gene24854 2.0kb upstream 2.0kb upstream 6237 true Tp57577_TGAC_v2_scaf_171: 79269-85505 Trifolium pratense
Tp57577_TGAC_v2_gene24854 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_171: 83506-85505 Trifolium pratense
Tp57577_TGAC_v2_gene24854 2.0kb downstream 2.0kb downstream 6237 true Tp57577_TGAC_v2_scaf_171: 77269-83505 Trifolium pratense
Tp57577_TGAC_v2_gene24854 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_171: 77269-79268 Trifolium pratense
Tp57577_TGAC_v2_gene24854 5.0kb upstream 5.0kb upstream 9237 true Tp57577_TGAC_v2_scaf_171: 79269-88505 Trifolium pratense
Tp57577_TGAC_v2_gene24854 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_171: 83506-88505 Trifolium pratense
Tp57577_TGAC_v2_gene24854 5.0kb downstream 5.0kb downstream 9237 true Tp57577_TGAC_v2_scaf_171: 74269-83505 Trifolium pratense
Tp57577_TGAC_v2_gene24854 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_171: 74269-79268 Trifolium pratense
Tp57577_TGAC_v2_gene24854 10.0kb upstream 10.0kb upstream 14237 true Tp57577_TGAC_v2_scaf_171: 79269-93505 Trifolium pratense
Tp57577_TGAC_v2_gene24854 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_171: 83506-93505 Trifolium pratense
Tp57577_TGAC_v2_gene24854 10.0kb downstream 10.0kb downstream 14237 true Tp57577_TGAC_v2_scaf_171: 69269-83505 Trifolium pratense
Tp57577_TGAC_v2_gene24854 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_171: 69269-79268 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304744 5265 Fabidae View MSA
124061792 5270 Rosid View MSA
123752091 5271 Pentapetalae View MSA
122793026 5272 Eudicot View MSA
122047660 5273 Angiosperm View MSA
121344773 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain