Gene : Tp57577_TGAC_v2_gene19427 T. pratense v2
Defline:  (1 of 1) PTHR21087:SF0 - INACTIVE SHIKIMATE KINASE LIKE 2, CHLOROPLASTIC-RELATED Genomic Order:  1846
Name:  ? Tp57577_TGAC_v2_gene19427 Secondary Identifier:  ? PAC:35970347
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19427 0.5kb upstream 0.5kb upstream 4701 true Tp57577_TGAC_v2_LG2: 17767380-17772080 Trifolium pratense
Tp57577_TGAC_v2_gene19427 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 17771581-17772080 Trifolium pratense
Tp57577_TGAC_v2_gene19427 0.5kb downstream 0.5kb downstream 4701 true Tp57577_TGAC_v2_LG2: 17766880-17771580 Trifolium pratense
Tp57577_TGAC_v2_gene19427 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 17766880-17767379 Trifolium pratense
Tp57577_TGAC_v2_gene19427 1.0kb upstream 1.0kb upstream 5201 true Tp57577_TGAC_v2_LG2: 17767380-17772580 Trifolium pratense
Tp57577_TGAC_v2_gene19427 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 17771581-17772580 Trifolium pratense
Tp57577_TGAC_v2_gene19427 1.0kb downstream 1.0kb downstream 5201 true Tp57577_TGAC_v2_LG2: 17766380-17771580 Trifolium pratense
Tp57577_TGAC_v2_gene19427 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 17766380-17767379 Trifolium pratense
Tp57577_TGAC_v2_gene19427 2.0kb upstream 2.0kb upstream 6201 true Tp57577_TGAC_v2_LG2: 17767380-17773580 Trifolium pratense
Tp57577_TGAC_v2_gene19427 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 17771581-17773580 Trifolium pratense
Tp57577_TGAC_v2_gene19427 2.0kb downstream 2.0kb downstream 6201 true Tp57577_TGAC_v2_LG2: 17765380-17771580 Trifolium pratense
Tp57577_TGAC_v2_gene19427 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 17765380-17767379 Trifolium pratense
Tp57577_TGAC_v2_gene19427 5.0kb upstream 5.0kb upstream 9201 true Tp57577_TGAC_v2_LG2: 17767380-17776580 Trifolium pratense
Tp57577_TGAC_v2_gene19427 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 17771581-17776580 Trifolium pratense
Tp57577_TGAC_v2_gene19427 5.0kb downstream 5.0kb downstream 9201 true Tp57577_TGAC_v2_LG2: 17762380-17771580 Trifolium pratense
Tp57577_TGAC_v2_gene19427 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 17762380-17767379 Trifolium pratense
Tp57577_TGAC_v2_gene19427 10.0kb upstream 10.0kb upstream 14201 true Tp57577_TGAC_v2_LG2: 17767380-17781580 Trifolium pratense
Tp57577_TGAC_v2_gene19427 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 17771581-17781580 Trifolium pratense
Tp57577_TGAC_v2_gene19427 10.0kb downstream 10.0kb downstream 14201 true Tp57577_TGAC_v2_LG2: 17757380-17771580 Trifolium pratense
Tp57577_TGAC_v2_gene19427 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 17757380-17767379 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300918 5265 Fabidae View MSA
124072915 5270 Rosid View MSA
123746382 5271 Pentapetalae View MSA
122790414 5272 Eudicot View MSA
122043641 5273 Angiosperm View MSA
121347570 5274 Embryophyte View MSA
123427676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain