Gene : Tp57577_TGAC_v2_gene32546 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  748
Name:  ? Tp57577_TGAC_v2_gene32546 Secondary Identifier:  ? PAC:35970938
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene32546 0.5kb upstream 0.5kb upstream 5480 true Tp57577_TGAC_v2_LG2: 7395768-7401247 Trifolium pratense
Tp57577_TGAC_v2_gene32546 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 7395768-7396267 Trifolium pratense
Tp57577_TGAC_v2_gene32546 0.5kb downstream 0.5kb downstream 5480 true Tp57577_TGAC_v2_LG2: 7396268-7401747 Trifolium pratense
Tp57577_TGAC_v2_gene32546 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 7401248-7401747 Trifolium pratense
Tp57577_TGAC_v2_gene32546 1.0kb upstream 1.0kb upstream 5980 true Tp57577_TGAC_v2_LG2: 7395268-7401247 Trifolium pratense
Tp57577_TGAC_v2_gene32546 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 7395268-7396267 Trifolium pratense
Tp57577_TGAC_v2_gene32546 1.0kb downstream 1.0kb downstream 5980 true Tp57577_TGAC_v2_LG2: 7396268-7402247 Trifolium pratense
Tp57577_TGAC_v2_gene32546 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 7401248-7402247 Trifolium pratense
Tp57577_TGAC_v2_gene32546 2.0kb upstream 2.0kb upstream 6980 true Tp57577_TGAC_v2_LG2: 7394268-7401247 Trifolium pratense
Tp57577_TGAC_v2_gene32546 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 7394268-7396267 Trifolium pratense
Tp57577_TGAC_v2_gene32546 2.0kb downstream 2.0kb downstream 6980 true Tp57577_TGAC_v2_LG2: 7396268-7403247 Trifolium pratense
Tp57577_TGAC_v2_gene32546 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 7401248-7403247 Trifolium pratense
Tp57577_TGAC_v2_gene32546 5.0kb upstream 5.0kb upstream 9980 true Tp57577_TGAC_v2_LG2: 7391268-7401247 Trifolium pratense
Tp57577_TGAC_v2_gene32546 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 7391268-7396267 Trifolium pratense
Tp57577_TGAC_v2_gene32546 5.0kb downstream 5.0kb downstream 9980 true Tp57577_TGAC_v2_LG2: 7396268-7406247 Trifolium pratense
Tp57577_TGAC_v2_gene32546 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 7401248-7406247 Trifolium pratense
Tp57577_TGAC_v2_gene32546 10.0kb upstream 10.0kb upstream 14980 true Tp57577_TGAC_v2_LG2: 7386268-7401247 Trifolium pratense
Tp57577_TGAC_v2_gene32546 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 7386268-7396267 Trifolium pratense
Tp57577_TGAC_v2_gene32546 10.0kb downstream 10.0kb downstream 14980 true Tp57577_TGAC_v2_LG2: 7396268-7411247 Trifolium pratense
Tp57577_TGAC_v2_gene32546 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 7401248-7411247 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303266 5265 Fabidae View MSA
124063770 5270 Rosid View MSA
123736958 5271 Pentapetalae View MSA
122790433 5272 Eudicot View MSA
122047420 5273 Angiosperm View MSA
121310738 5274 Embryophyte View MSA
123348150 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain