Gene : Tp57577_TGAC_v2_gene24956 T. pratense v2
Defline:  (1 of 60) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  44
Name:  ? Tp57577_TGAC_v2_gene24956 Secondary Identifier:  ? PAC:35968792
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene24956 0.5kb upstream 0.5kb upstream 4085 true Tp57577_TGAC_v2_scaf_177: 331046-335130 Trifolium pratense
Tp57577_TGAC_v2_gene24956 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_177: 331046-331545 Trifolium pratense
Tp57577_TGAC_v2_gene24956 0.5kb downstream 0.5kb downstream 4085 true Tp57577_TGAC_v2_scaf_177: 331546-335630 Trifolium pratense
Tp57577_TGAC_v2_gene24956 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_177: 335131-335630 Trifolium pratense
Tp57577_TGAC_v2_gene24956 1.0kb upstream 1.0kb upstream 4585 true Tp57577_TGAC_v2_scaf_177: 330546-335130 Trifolium pratense
Tp57577_TGAC_v2_gene24956 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_177: 330546-331545 Trifolium pratense
Tp57577_TGAC_v2_gene24956 1.0kb downstream 1.0kb downstream 4585 true Tp57577_TGAC_v2_scaf_177: 331546-336130 Trifolium pratense
Tp57577_TGAC_v2_gene24956 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_177: 335131-336130 Trifolium pratense
Tp57577_TGAC_v2_gene24956 2.0kb upstream 2.0kb upstream 5585 true Tp57577_TGAC_v2_scaf_177: 329546-335130 Trifolium pratense
Tp57577_TGAC_v2_gene24956 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_177: 329546-331545 Trifolium pratense
Tp57577_TGAC_v2_gene24956 2.0kb downstream 2.0kb downstream 5585 true Tp57577_TGAC_v2_scaf_177: 331546-337130 Trifolium pratense
Tp57577_TGAC_v2_gene24956 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_177: 335131-337130 Trifolium pratense
Tp57577_TGAC_v2_gene24956 5.0kb upstream 5.0kb upstream 8585 true Tp57577_TGAC_v2_scaf_177: 326546-335130 Trifolium pratense
Tp57577_TGAC_v2_gene24956 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_177: 326546-331545 Trifolium pratense
Tp57577_TGAC_v2_gene24956 5.0kb downstream 5.0kb downstream 8585 true Tp57577_TGAC_v2_scaf_177: 331546-340130 Trifolium pratense
Tp57577_TGAC_v2_gene24956 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_177: 335131-340130 Trifolium pratense
Tp57577_TGAC_v2_gene24956 10.0kb upstream 10.0kb upstream 13585 true Tp57577_TGAC_v2_scaf_177: 321546-335130 Trifolium pratense
Tp57577_TGAC_v2_gene24956 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_177: 321546-331545 Trifolium pratense
Tp57577_TGAC_v2_gene24956 10.0kb downstream 10.0kb downstream 13585 true Tp57577_TGAC_v2_scaf_177: 331546-345130 Trifolium pratense
Tp57577_TGAC_v2_gene24956 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_177: 335131-345130 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314572 5265 Fabidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain