Gene : Tp57577_TGAC_v2_gene25160 T. pratense v2
Defline:  (1 of 4) PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED Genomic Order:  2
Name:  ? Tp57577_TGAC_v2_gene25160 Secondary Identifier:  ? PAC:35961394
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene25160 0.5kb upstream 0.5kb upstream 5409 true Tp57577_TGAC_v2_scaf_174: 8057-13465 Trifolium pratense
Tp57577_TGAC_v2_gene25160 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_174: 12966-13465 Trifolium pratense
Tp57577_TGAC_v2_gene25160 0.5kb downstream 0.5kb downstream 5409 true Tp57577_TGAC_v2_scaf_174: 7557-12965 Trifolium pratense
Tp57577_TGAC_v2_gene25160 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_174: 7557-8056 Trifolium pratense
Tp57577_TGAC_v2_gene25160 1.0kb upstream 1.0kb upstream 5909 true Tp57577_TGAC_v2_scaf_174: 8057-13965 Trifolium pratense
Tp57577_TGAC_v2_gene25160 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_174: 12966-13965 Trifolium pratense
Tp57577_TGAC_v2_gene25160 1.0kb downstream 1.0kb downstream 5909 true Tp57577_TGAC_v2_scaf_174: 7057-12965 Trifolium pratense
Tp57577_TGAC_v2_gene25160 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_174: 7057-8056 Trifolium pratense
Tp57577_TGAC_v2_gene25160 2.0kb upstream 2.0kb upstream 6909 true Tp57577_TGAC_v2_scaf_174: 8057-14965 Trifolium pratense
Tp57577_TGAC_v2_gene25160 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_174: 12966-14965 Trifolium pratense
Tp57577_TGAC_v2_gene25160 2.0kb downstream 2.0kb downstream 6909 true Tp57577_TGAC_v2_scaf_174: 6057-12965 Trifolium pratense
Tp57577_TGAC_v2_gene25160 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_174: 6057-8056 Trifolium pratense
Tp57577_TGAC_v2_gene25160 5.0kb upstream 5.0kb upstream 9909 true Tp57577_TGAC_v2_scaf_174: 8057-17965 Trifolium pratense
Tp57577_TGAC_v2_gene25160 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_174: 12966-17965 Trifolium pratense
Tp57577_TGAC_v2_gene25160 5.0kb downstream 5.0kb downstream 9909 true Tp57577_TGAC_v2_scaf_174: 3057-12965 Trifolium pratense
Tp57577_TGAC_v2_gene25160 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_174: 3057-8056 Trifolium pratense
Tp57577_TGAC_v2_gene25160 10.0kb upstream 10.0kb upstream 14909 true Tp57577_TGAC_v2_scaf_174: 8057-22965 Trifolium pratense
Tp57577_TGAC_v2_gene25160 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_174: 12966-22965 Trifolium pratense
Tp57577_TGAC_v2_gene25160 10.0kb downstream 10.0kb downstream 12965 true Tp57577_TGAC_v2_scaf_174: 1-12965 Trifolium pratense
Tp57577_TGAC_v2_gene25160 10.0kb downstream 10.0kb downstream 8056 false Tp57577_TGAC_v2_scaf_174: 1-8056 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311433 5265 Fabidae View MSA
124060539 5270 Rosid View MSA
123746535 5271 Pentapetalae View MSA
122785782 5272 Eudicot View MSA
122047623 5273 Angiosperm View MSA
121348921 5274 Embryophyte View MSA
123381080 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain