Gene : Tp57577_TGAC_v2_gene5929 T. pratense v2
Defline:  (1 of 2) 2.3.1.9 - Acetyl-CoA C-acetyltransferase / Acetoacetyl-CoA thiolase Genomic Order:  2328
Name:  ? Tp57577_TGAC_v2_gene5929 Secondary Identifier:  ? PAC:35969722
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense ILEUDEG-PWY Trifolium pratense pathologic  
Tpratense PWY-5910 Trifolium pratense pathologic  
Tpratense PWY-922 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5929 0.5kb upstream 0.5kb upstream 5045 true Tp57577_TGAC_v2_LG2: 22009067-22014111 Trifolium pratense
Tp57577_TGAC_v2_gene5929 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 22009067-22009566 Trifolium pratense
Tp57577_TGAC_v2_gene5929 0.5kb downstream 0.5kb downstream 5045 true Tp57577_TGAC_v2_LG2: 22009567-22014611 Trifolium pratense
Tp57577_TGAC_v2_gene5929 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 22014112-22014611 Trifolium pratense
Tp57577_TGAC_v2_gene5929 1.0kb upstream 1.0kb upstream 5545 true Tp57577_TGAC_v2_LG2: 22008567-22014111 Trifolium pratense
Tp57577_TGAC_v2_gene5929 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 22008567-22009566 Trifolium pratense
Tp57577_TGAC_v2_gene5929 1.0kb downstream 1.0kb downstream 5545 true Tp57577_TGAC_v2_LG2: 22009567-22015111 Trifolium pratense
Tp57577_TGAC_v2_gene5929 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 22014112-22015111 Trifolium pratense
Tp57577_TGAC_v2_gene5929 2.0kb upstream 2.0kb upstream 6545 true Tp57577_TGAC_v2_LG2: 22007567-22014111 Trifolium pratense
Tp57577_TGAC_v2_gene5929 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 22007567-22009566 Trifolium pratense
Tp57577_TGAC_v2_gene5929 2.0kb downstream 2.0kb downstream 6545 true Tp57577_TGAC_v2_LG2: 22009567-22016111 Trifolium pratense
Tp57577_TGAC_v2_gene5929 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 22014112-22016111 Trifolium pratense
Tp57577_TGAC_v2_gene5929 5.0kb upstream 5.0kb upstream 9545 true Tp57577_TGAC_v2_LG2: 22004567-22014111 Trifolium pratense
Tp57577_TGAC_v2_gene5929 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 22004567-22009566 Trifolium pratense
Tp57577_TGAC_v2_gene5929 5.0kb downstream 5.0kb downstream 9545 true Tp57577_TGAC_v2_LG2: 22009567-22019111 Trifolium pratense
Tp57577_TGAC_v2_gene5929 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 22014112-22019111 Trifolium pratense
Tp57577_TGAC_v2_gene5929 10.0kb upstream 10.0kb upstream 14545 true Tp57577_TGAC_v2_LG2: 21999567-22014111 Trifolium pratense
Tp57577_TGAC_v2_gene5929 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 21999567-22009566 Trifolium pratense
Tp57577_TGAC_v2_gene5929 10.0kb downstream 10.0kb downstream 14545 true Tp57577_TGAC_v2_LG2: 22009567-22024111 Trifolium pratense
Tp57577_TGAC_v2_gene5929 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 22014112-22024111 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301952 5265 Fabidae View MSA
124066506 5270 Rosid View MSA
123747270 5271 Pentapetalae View MSA
122788364 5272 Eudicot View MSA
122045789 5273 Angiosperm View MSA
121344005 5274 Embryophyte View MSA
123427573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain