Gene : Tp57577_TGAC_v2_gene5442 T. pratense v2

Genomic Order:  3064 Name:  ? Tp57577_TGAC_v2_gene5442
Secondary Identifier:  ? PAC:35970516

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5442 0.5kb upstream 0.5kb upstream 3159 true Tp57577_TGAC_v2_LG2: 27772096-27775254 Trifolium pratense
Tp57577_TGAC_v2_gene5442 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 27772096-27772595 Trifolium pratense
Tp57577_TGAC_v2_gene5442 0.5kb downstream 0.5kb downstream 3159 true Tp57577_TGAC_v2_LG2: 27772596-27775754 Trifolium pratense
Tp57577_TGAC_v2_gene5442 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 27775255-27775754 Trifolium pratense
Tp57577_TGAC_v2_gene5442 1.0kb upstream 1.0kb upstream 3659 true Tp57577_TGAC_v2_LG2: 27771596-27775254 Trifolium pratense
Tp57577_TGAC_v2_gene5442 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 27771596-27772595 Trifolium pratense
Tp57577_TGAC_v2_gene5442 1.0kb downstream 1.0kb downstream 3659 true Tp57577_TGAC_v2_LG2: 27772596-27776254 Trifolium pratense
Tp57577_TGAC_v2_gene5442 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 27775255-27776254 Trifolium pratense
Tp57577_TGAC_v2_gene5442 2.0kb upstream 2.0kb upstream 4659 true Tp57577_TGAC_v2_LG2: 27770596-27775254 Trifolium pratense
Tp57577_TGAC_v2_gene5442 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 27770596-27772595 Trifolium pratense
Tp57577_TGAC_v2_gene5442 2.0kb downstream 2.0kb downstream 4659 true Tp57577_TGAC_v2_LG2: 27772596-27777254 Trifolium pratense
Tp57577_TGAC_v2_gene5442 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 27775255-27777254 Trifolium pratense
Tp57577_TGAC_v2_gene5442 5.0kb upstream 5.0kb upstream 7659 true Tp57577_TGAC_v2_LG2: 27767596-27775254 Trifolium pratense
Tp57577_TGAC_v2_gene5442 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 27767596-27772595 Trifolium pratense
Tp57577_TGAC_v2_gene5442 5.0kb downstream 5.0kb downstream 7659 true Tp57577_TGAC_v2_LG2: 27772596-27780254 Trifolium pratense
Tp57577_TGAC_v2_gene5442 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 27775255-27780254 Trifolium pratense
Tp57577_TGAC_v2_gene5442 10.0kb upstream 10.0kb upstream 12659 true Tp57577_TGAC_v2_LG2: 27762596-27775254 Trifolium pratense
Tp57577_TGAC_v2_gene5442 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 27762596-27772595 Trifolium pratense
Tp57577_TGAC_v2_gene5442 10.0kb downstream 10.0kb downstream 12659 true Tp57577_TGAC_v2_LG2: 27772596-27785254 Trifolium pratense
Tp57577_TGAC_v2_gene5442 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 27775255-27785254 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305906 5265 Fabidae View MSA
124060482 5270 Rosid View MSA
123739392 5271 Pentapetalae View MSA
122790873 5272 Eudicot View MSA
122045595 5273 Angiosperm View MSA
121345688 5274 Embryophyte View MSA
123425911 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain