Gene : Tp57577_TGAC_v2_gene5953 T. pratense v2
Defline:  (1 of 3) PTHR31636:SF45 - SCARECROW-LIKE PROTEIN 13 Genomic Order:  2302
Name:  ? Tp57577_TGAC_v2_gene5953 Secondary Identifier:  ? PAC:35970131
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5953 0.5kb upstream 0.5kb upstream 3180 true Tp57577_TGAC_v2_LG2: 21867017-21870196 Trifolium pratense
Tp57577_TGAC_v2_gene5953 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 21869697-21870196 Trifolium pratense
Tp57577_TGAC_v2_gene5953 0.5kb downstream 0.5kb downstream 3180 true Tp57577_TGAC_v2_LG2: 21866517-21869696 Trifolium pratense
Tp57577_TGAC_v2_gene5953 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 21866517-21867016 Trifolium pratense
Tp57577_TGAC_v2_gene5953 1.0kb upstream 1.0kb upstream 3680 true Tp57577_TGAC_v2_LG2: 21867017-21870696 Trifolium pratense
Tp57577_TGAC_v2_gene5953 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 21869697-21870696 Trifolium pratense
Tp57577_TGAC_v2_gene5953 1.0kb downstream 1.0kb downstream 3680 true Tp57577_TGAC_v2_LG2: 21866017-21869696 Trifolium pratense
Tp57577_TGAC_v2_gene5953 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 21866017-21867016 Trifolium pratense
Tp57577_TGAC_v2_gene5953 2.0kb upstream 2.0kb upstream 4680 true Tp57577_TGAC_v2_LG2: 21867017-21871696 Trifolium pratense
Tp57577_TGAC_v2_gene5953 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 21869697-21871696 Trifolium pratense
Tp57577_TGAC_v2_gene5953 2.0kb downstream 2.0kb downstream 4680 true Tp57577_TGAC_v2_LG2: 21865017-21869696 Trifolium pratense
Tp57577_TGAC_v2_gene5953 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 21865017-21867016 Trifolium pratense
Tp57577_TGAC_v2_gene5953 5.0kb upstream 5.0kb upstream 7680 true Tp57577_TGAC_v2_LG2: 21867017-21874696 Trifolium pratense
Tp57577_TGAC_v2_gene5953 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 21869697-21874696 Trifolium pratense
Tp57577_TGAC_v2_gene5953 5.0kb downstream 5.0kb downstream 7680 true Tp57577_TGAC_v2_LG2: 21862017-21869696 Trifolium pratense
Tp57577_TGAC_v2_gene5953 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 21862017-21867016 Trifolium pratense
Tp57577_TGAC_v2_gene5953 10.0kb upstream 10.0kb upstream 12680 true Tp57577_TGAC_v2_LG2: 21867017-21879696 Trifolium pratense
Tp57577_TGAC_v2_gene5953 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 21869697-21879696 Trifolium pratense
Tp57577_TGAC_v2_gene5953 10.0kb downstream 10.0kb downstream 12680 true Tp57577_TGAC_v2_LG2: 21857017-21869696 Trifolium pratense
Tp57577_TGAC_v2_gene5953 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 21857017-21867016 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310892 5265 Fabidae View MSA
124063713 5270 Rosid View MSA
123752771 5271 Pentapetalae View MSA
122794202 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain