Gene : Tp57577_TGAC_v2_gene5416 T. pratense v2
Defline:  (1 of 1) PTHR21236//PTHR21236:SF9 - GOLGI MEMBRANE PROTEIN YIP1 // SUBFAMILY NOT NAMED Genomic Order:  3009
Name:  ? Tp57577_TGAC_v2_gene5416 Secondary Identifier:  ? PAC:35971423
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene5416 0.5kb upstream 0.5kb upstream 4934 true Tp57577_TGAC_v2_LG2: 27347746-27352679 Trifolium pratense
Tp57577_TGAC_v2_gene5416 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 27347746-27348245 Trifolium pratense
Tp57577_TGAC_v2_gene5416 0.5kb downstream 0.5kb downstream 4934 true Tp57577_TGAC_v2_LG2: 27348246-27353179 Trifolium pratense
Tp57577_TGAC_v2_gene5416 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 27352680-27353179 Trifolium pratense
Tp57577_TGAC_v2_gene5416 1.0kb upstream 1.0kb upstream 5434 true Tp57577_TGAC_v2_LG2: 27347246-27352679 Trifolium pratense
Tp57577_TGAC_v2_gene5416 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 27347246-27348245 Trifolium pratense
Tp57577_TGAC_v2_gene5416 1.0kb downstream 1.0kb downstream 5434 true Tp57577_TGAC_v2_LG2: 27348246-27353679 Trifolium pratense
Tp57577_TGAC_v2_gene5416 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 27352680-27353679 Trifolium pratense
Tp57577_TGAC_v2_gene5416 2.0kb upstream 2.0kb upstream 6434 true Tp57577_TGAC_v2_LG2: 27346246-27352679 Trifolium pratense
Tp57577_TGAC_v2_gene5416 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 27346246-27348245 Trifolium pratense
Tp57577_TGAC_v2_gene5416 2.0kb downstream 2.0kb downstream 6434 true Tp57577_TGAC_v2_LG2: 27348246-27354679 Trifolium pratense
Tp57577_TGAC_v2_gene5416 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 27352680-27354679 Trifolium pratense
Tp57577_TGAC_v2_gene5416 5.0kb upstream 5.0kb upstream 9434 true Tp57577_TGAC_v2_LG2: 27343246-27352679 Trifolium pratense
Tp57577_TGAC_v2_gene5416 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 27343246-27348245 Trifolium pratense
Tp57577_TGAC_v2_gene5416 5.0kb downstream 5.0kb downstream 9434 true Tp57577_TGAC_v2_LG2: 27348246-27357679 Trifolium pratense
Tp57577_TGAC_v2_gene5416 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 27352680-27357679 Trifolium pratense
Tp57577_TGAC_v2_gene5416 10.0kb upstream 10.0kb upstream 14434 true Tp57577_TGAC_v2_LG2: 27338246-27352679 Trifolium pratense
Tp57577_TGAC_v2_gene5416 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 27338246-27348245 Trifolium pratense
Tp57577_TGAC_v2_gene5416 10.0kb downstream 10.0kb downstream 14434 true Tp57577_TGAC_v2_LG2: 27348246-27362679 Trifolium pratense
Tp57577_TGAC_v2_gene5416 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 27352680-27362679 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301054 5265 Fabidae View MSA
124062311 5270 Rosid View MSA
123737556 5271 Pentapetalae View MSA
122791123 5272 Eudicot View MSA
122046860 5273 Angiosperm View MSA
121349329 5274 Embryophyte View MSA
123428190 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain