Gene : Tp57577_TGAC_v2_gene38327 T. pratense v2
Defline:  (1 of 2) PTHR21109 - MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 Genomic Order:  2038
Name:  ? Tp57577_TGAC_v2_gene38327 Secondary Identifier:  ? PAC:35973316
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38327 0.5kb upstream 0.5kb upstream 2863 true Tp57577_TGAC_v2_LG2: 19487630-19490492 Trifolium pratense
Tp57577_TGAC_v2_gene38327 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 19489993-19490492 Trifolium pratense
Tp57577_TGAC_v2_gene38327 0.5kb downstream 0.5kb downstream 2863 true Tp57577_TGAC_v2_LG2: 19487130-19489992 Trifolium pratense
Tp57577_TGAC_v2_gene38327 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 19487130-19487629 Trifolium pratense
Tp57577_TGAC_v2_gene38327 1.0kb upstream 1.0kb upstream 3363 true Tp57577_TGAC_v2_LG2: 19487630-19490992 Trifolium pratense
Tp57577_TGAC_v2_gene38327 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 19489993-19490992 Trifolium pratense
Tp57577_TGAC_v2_gene38327 1.0kb downstream 1.0kb downstream 3363 true Tp57577_TGAC_v2_LG2: 19486630-19489992 Trifolium pratense
Tp57577_TGAC_v2_gene38327 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 19486630-19487629 Trifolium pratense
Tp57577_TGAC_v2_gene38327 2.0kb upstream 2.0kb upstream 4363 true Tp57577_TGAC_v2_LG2: 19487630-19491992 Trifolium pratense
Tp57577_TGAC_v2_gene38327 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 19489993-19491992 Trifolium pratense
Tp57577_TGAC_v2_gene38327 2.0kb downstream 2.0kb downstream 4363 true Tp57577_TGAC_v2_LG2: 19485630-19489992 Trifolium pratense
Tp57577_TGAC_v2_gene38327 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 19485630-19487629 Trifolium pratense
Tp57577_TGAC_v2_gene38327 5.0kb upstream 5.0kb upstream 7363 true Tp57577_TGAC_v2_LG2: 19487630-19494992 Trifolium pratense
Tp57577_TGAC_v2_gene38327 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 19489993-19494992 Trifolium pratense
Tp57577_TGAC_v2_gene38327 5.0kb downstream 5.0kb downstream 7363 true Tp57577_TGAC_v2_LG2: 19482630-19489992 Trifolium pratense
Tp57577_TGAC_v2_gene38327 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 19482630-19487629 Trifolium pratense
Tp57577_TGAC_v2_gene38327 10.0kb upstream 10.0kb upstream 12363 true Tp57577_TGAC_v2_LG2: 19487630-19499992 Trifolium pratense
Tp57577_TGAC_v2_gene38327 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 19489993-19499992 Trifolium pratense
Tp57577_TGAC_v2_gene38327 10.0kb downstream 10.0kb downstream 12363 true Tp57577_TGAC_v2_LG2: 19477630-19489992 Trifolium pratense
Tp57577_TGAC_v2_gene38327 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 19477630-19487629 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027800 5273 Angiosperm View MSA
122310334 5265 Fabidae View MSA
124065865 5270 Rosid View MSA
123745699 5271 Pentapetalae View MSA
122793832 5272 Eudicot View MSA
121349916 5274 Embryophyte View MSA
123426860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain