Gene : Tp57577_TGAC_v2_gene38314 T. pratense v2
Defline:  (1 of 2) 2.1.1.190 - 23S rRNA (uracil(1939)-C(5))-methyltransferase / RNA uridine methyltransferase A Genomic Order:  2036
Name:  ? Tp57577_TGAC_v2_gene38314 Secondary Identifier:  ? PAC:35970105
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene38314 0.5kb upstream 0.5kb upstream 12263 true Tp57577_TGAC_v2_LG2: 19457820-19470082 Trifolium pratense
Tp57577_TGAC_v2_gene38314 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 19457820-19458319 Trifolium pratense
Tp57577_TGAC_v2_gene38314 0.5kb downstream 0.5kb downstream 12263 true Tp57577_TGAC_v2_LG2: 19458320-19470582 Trifolium pratense
Tp57577_TGAC_v2_gene38314 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 19470083-19470582 Trifolium pratense
Tp57577_TGAC_v2_gene38314 1.0kb upstream 1.0kb upstream 12763 true Tp57577_TGAC_v2_LG2: 19457320-19470082 Trifolium pratense
Tp57577_TGAC_v2_gene38314 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 19457320-19458319 Trifolium pratense
Tp57577_TGAC_v2_gene38314 1.0kb downstream 1.0kb downstream 12763 true Tp57577_TGAC_v2_LG2: 19458320-19471082 Trifolium pratense
Tp57577_TGAC_v2_gene38314 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 19470083-19471082 Trifolium pratense
Tp57577_TGAC_v2_gene38314 2.0kb upstream 2.0kb upstream 13763 true Tp57577_TGAC_v2_LG2: 19456320-19470082 Trifolium pratense
Tp57577_TGAC_v2_gene38314 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 19456320-19458319 Trifolium pratense
Tp57577_TGAC_v2_gene38314 2.0kb downstream 2.0kb downstream 13763 true Tp57577_TGAC_v2_LG2: 19458320-19472082 Trifolium pratense
Tp57577_TGAC_v2_gene38314 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 19470083-19472082 Trifolium pratense
Tp57577_TGAC_v2_gene38314 5.0kb upstream 5.0kb upstream 16763 true Tp57577_TGAC_v2_LG2: 19453320-19470082 Trifolium pratense
Tp57577_TGAC_v2_gene38314 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 19453320-19458319 Trifolium pratense
Tp57577_TGAC_v2_gene38314 5.0kb downstream 5.0kb downstream 16763 true Tp57577_TGAC_v2_LG2: 19458320-19475082 Trifolium pratense
Tp57577_TGAC_v2_gene38314 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 19470083-19475082 Trifolium pratense
Tp57577_TGAC_v2_gene38314 10.0kb upstream 10.0kb upstream 21763 true Tp57577_TGAC_v2_LG2: 19448320-19470082 Trifolium pratense
Tp57577_TGAC_v2_gene38314 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 19448320-19458319 Trifolium pratense
Tp57577_TGAC_v2_gene38314 10.0kb downstream 10.0kb downstream 21763 true Tp57577_TGAC_v2_LG2: 19458320-19480082 Trifolium pratense
Tp57577_TGAC_v2_gene38314 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 19470083-19480082 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303719 5265 Fabidae View MSA
124063737 5270 Rosid View MSA
123738222 5271 Pentapetalae View MSA
122796833 5272 Eudicot View MSA
122044630 5273 Angiosperm View MSA
121346457 5274 Embryophyte View MSA
123428846 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain