Gene : Tp57577_TGAC_v2_gene37019 T. pratense v2
Defline:  (1 of 2) K10591 - E3 ubiquitin-protein ligase NEDD4 (NEDD4, RSP5) Genomic Order:  2877
Name:  ? Tp57577_TGAC_v2_gene37019 Secondary Identifier:  ? PAC:35972861
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene37019 0.5kb upstream 0.5kb upstream 7187 true Tp57577_TGAC_v2_LG2: 26386623-26393809 Trifolium pratense
Tp57577_TGAC_v2_gene37019 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 26386623-26387122 Trifolium pratense
Tp57577_TGAC_v2_gene37019 0.5kb downstream 0.5kb downstream 7187 true Tp57577_TGAC_v2_LG2: 26387123-26394309 Trifolium pratense
Tp57577_TGAC_v2_gene37019 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 26393810-26394309 Trifolium pratense
Tp57577_TGAC_v2_gene37019 1.0kb upstream 1.0kb upstream 7687 true Tp57577_TGAC_v2_LG2: 26386123-26393809 Trifolium pratense
Tp57577_TGAC_v2_gene37019 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 26386123-26387122 Trifolium pratense
Tp57577_TGAC_v2_gene37019 1.0kb downstream 1.0kb downstream 7687 true Tp57577_TGAC_v2_LG2: 26387123-26394809 Trifolium pratense
Tp57577_TGAC_v2_gene37019 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 26393810-26394809 Trifolium pratense
Tp57577_TGAC_v2_gene37019 2.0kb upstream 2.0kb upstream 8687 true Tp57577_TGAC_v2_LG2: 26385123-26393809 Trifolium pratense
Tp57577_TGAC_v2_gene37019 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 26385123-26387122 Trifolium pratense
Tp57577_TGAC_v2_gene37019 2.0kb downstream 2.0kb downstream 8687 true Tp57577_TGAC_v2_LG2: 26387123-26395809 Trifolium pratense
Tp57577_TGAC_v2_gene37019 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 26393810-26395809 Trifolium pratense
Tp57577_TGAC_v2_gene37019 5.0kb upstream 5.0kb upstream 11687 true Tp57577_TGAC_v2_LG2: 26382123-26393809 Trifolium pratense
Tp57577_TGAC_v2_gene37019 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 26382123-26387122 Trifolium pratense
Tp57577_TGAC_v2_gene37019 5.0kb downstream 5.0kb downstream 11687 true Tp57577_TGAC_v2_LG2: 26387123-26398809 Trifolium pratense
Tp57577_TGAC_v2_gene37019 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 26393810-26398809 Trifolium pratense
Tp57577_TGAC_v2_gene37019 10.0kb upstream 10.0kb upstream 16687 true Tp57577_TGAC_v2_LG2: 26377123-26393809 Trifolium pratense
Tp57577_TGAC_v2_gene37019 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 26377123-26387122 Trifolium pratense
Tp57577_TGAC_v2_gene37019 10.0kb downstream 10.0kb downstream 16687 true Tp57577_TGAC_v2_LG2: 26387123-26403809 Trifolium pratense
Tp57577_TGAC_v2_gene37019 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 26393810-26403809 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299512 5265 Fabidae View MSA
124063401 5270 Rosid View MSA
123749847 5271 Pentapetalae View MSA
122786985 5272 Eudicot View MSA
122048097 5273 Angiosperm View MSA
123429069 5275 Viridiplantae View MSA
121348188 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain