Gene : Tp57577_TGAC_v2_gene37058 T. pratense v2
Defline:  (1 of 2) PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL Genomic Order:  2869
Name:  ? Tp57577_TGAC_v2_gene37058 Secondary Identifier:  ? PAC:35970676
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense GLYSYN-PWY Trifolium pratense pathologic  
Tpratense PWY-2161 Trifolium pratense pathologic  
Tpratense PWY-3841 Trifolium pratense pathologic  
Tpratense SER-GLYSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene37058 0.5kb upstream 0.5kb upstream 7849 true Tp57577_TGAC_v2_LG2: 26329155-26337003 Trifolium pratense
Tp57577_TGAC_v2_gene37058 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 26336504-26337003 Trifolium pratense
Tp57577_TGAC_v2_gene37058 0.5kb downstream 0.5kb downstream 7849 true Tp57577_TGAC_v2_LG2: 26328655-26336503 Trifolium pratense
Tp57577_TGAC_v2_gene37058 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 26328655-26329154 Trifolium pratense
Tp57577_TGAC_v2_gene37058 1.0kb upstream 1.0kb upstream 8349 true Tp57577_TGAC_v2_LG2: 26329155-26337503 Trifolium pratense
Tp57577_TGAC_v2_gene37058 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 26336504-26337503 Trifolium pratense
Tp57577_TGAC_v2_gene37058 1.0kb downstream 1.0kb downstream 8349 true Tp57577_TGAC_v2_LG2: 26328155-26336503 Trifolium pratense
Tp57577_TGAC_v2_gene37058 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 26328155-26329154 Trifolium pratense
Tp57577_TGAC_v2_gene37058 2.0kb upstream 2.0kb upstream 9349 true Tp57577_TGAC_v2_LG2: 26329155-26338503 Trifolium pratense
Tp57577_TGAC_v2_gene37058 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 26336504-26338503 Trifolium pratense
Tp57577_TGAC_v2_gene37058 2.0kb downstream 2.0kb downstream 9349 true Tp57577_TGAC_v2_LG2: 26327155-26336503 Trifolium pratense
Tp57577_TGAC_v2_gene37058 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 26327155-26329154 Trifolium pratense
Tp57577_TGAC_v2_gene37058 5.0kb upstream 5.0kb upstream 12349 true Tp57577_TGAC_v2_LG2: 26329155-26341503 Trifolium pratense
Tp57577_TGAC_v2_gene37058 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 26336504-26341503 Trifolium pratense
Tp57577_TGAC_v2_gene37058 5.0kb downstream 5.0kb downstream 12349 true Tp57577_TGAC_v2_LG2: 26324155-26336503 Trifolium pratense
Tp57577_TGAC_v2_gene37058 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 26324155-26329154 Trifolium pratense
Tp57577_TGAC_v2_gene37058 10.0kb upstream 10.0kb upstream 17349 true Tp57577_TGAC_v2_LG2: 26329155-26346503 Trifolium pratense
Tp57577_TGAC_v2_gene37058 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 26336504-26346503 Trifolium pratense
Tp57577_TGAC_v2_gene37058 10.0kb downstream 10.0kb downstream 17349 true Tp57577_TGAC_v2_LG2: 26319155-26336503 Trifolium pratense
Tp57577_TGAC_v2_gene37058 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 26319155-26329154 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314119 5265 Fabidae View MSA
124064979 5270 Rosid View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain