Gene : Tp57577_TGAC_v2_gene9177 T. pratense v2
Defline:  (1 of 3) PF04278 - Tic22-like family (Tic22) Genomic Order:  329
Name:  ? Tp57577_TGAC_v2_gene9177 Secondary Identifier:  ? PAC:35972620
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9177 0.5kb upstream 0.5kb upstream 35953 true Tp57577_TGAC_v2_LG2: 3379387-3415339 Trifolium pratense
Tp57577_TGAC_v2_gene9177 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 3414840-3415339 Trifolium pratense
Tp57577_TGAC_v2_gene9177 0.5kb downstream 0.5kb downstream 35953 true Tp57577_TGAC_v2_LG2: 3378887-3414839 Trifolium pratense
Tp57577_TGAC_v2_gene9177 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 3378887-3379386 Trifolium pratense
Tp57577_TGAC_v2_gene9177 1.0kb upstream 1.0kb upstream 36453 true Tp57577_TGAC_v2_LG2: 3379387-3415839 Trifolium pratense
Tp57577_TGAC_v2_gene9177 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 3414840-3415839 Trifolium pratense
Tp57577_TGAC_v2_gene9177 1.0kb downstream 1.0kb downstream 36453 true Tp57577_TGAC_v2_LG2: 3378387-3414839 Trifolium pratense
Tp57577_TGAC_v2_gene9177 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 3378387-3379386 Trifolium pratense
Tp57577_TGAC_v2_gene9177 2.0kb upstream 2.0kb upstream 37453 true Tp57577_TGAC_v2_LG2: 3379387-3416839 Trifolium pratense
Tp57577_TGAC_v2_gene9177 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 3414840-3416839 Trifolium pratense
Tp57577_TGAC_v2_gene9177 2.0kb downstream 2.0kb downstream 37453 true Tp57577_TGAC_v2_LG2: 3377387-3414839 Trifolium pratense
Tp57577_TGAC_v2_gene9177 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 3377387-3379386 Trifolium pratense
Tp57577_TGAC_v2_gene9177 5.0kb upstream 5.0kb upstream 40453 true Tp57577_TGAC_v2_LG2: 3379387-3419839 Trifolium pratense
Tp57577_TGAC_v2_gene9177 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 3414840-3419839 Trifolium pratense
Tp57577_TGAC_v2_gene9177 5.0kb downstream 5.0kb downstream 40453 true Tp57577_TGAC_v2_LG2: 3374387-3414839 Trifolium pratense
Tp57577_TGAC_v2_gene9177 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 3374387-3379386 Trifolium pratense
Tp57577_TGAC_v2_gene9177 10.0kb upstream 10.0kb upstream 45453 true Tp57577_TGAC_v2_LG2: 3379387-3424839 Trifolium pratense
Tp57577_TGAC_v2_gene9177 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 3414840-3424839 Trifolium pratense
Tp57577_TGAC_v2_gene9177 10.0kb downstream 10.0kb downstream 45453 true Tp57577_TGAC_v2_LG2: 3369387-3414839 Trifolium pratense
Tp57577_TGAC_v2_gene9177 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 3369387-3379386 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304584 5265 Fabidae View MSA
124063444 5270 Rosid View MSA
123744483 5271 Pentapetalae View MSA
122790475 5272 Eudicot View MSA
122047380 5273 Angiosperm View MSA
121344233 5274 Embryophyte View MSA
123380010 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain