Gene : Tp57577_TGAC_v2_gene12038 T. pratense v2
Defline:  (1 of 5) PF12056 - Protein of unknown function (DUF3537) (DUF3537) Genomic Order:  2667
Name:  ? Tp57577_TGAC_v2_gene12038 Secondary Identifier:  ? PAC:35981014
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12038 0.5kb upstream 0.5kb upstream 3003 true Tp57577_TGAC_v2_LG1: 22459898-22462900 Trifolium pratense
Tp57577_TGAC_v2_gene12038 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 22462401-22462900 Trifolium pratense
Tp57577_TGAC_v2_gene12038 0.5kb downstream 0.5kb downstream 3003 true Tp57577_TGAC_v2_LG1: 22459398-22462400 Trifolium pratense
Tp57577_TGAC_v2_gene12038 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 22459398-22459897 Trifolium pratense
Tp57577_TGAC_v2_gene12038 1.0kb upstream 1.0kb upstream 3503 true Tp57577_TGAC_v2_LG1: 22459898-22463400 Trifolium pratense
Tp57577_TGAC_v2_gene12038 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 22462401-22463400 Trifolium pratense
Tp57577_TGAC_v2_gene12038 1.0kb downstream 1.0kb downstream 3503 true Tp57577_TGAC_v2_LG1: 22458898-22462400 Trifolium pratense
Tp57577_TGAC_v2_gene12038 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 22458898-22459897 Trifolium pratense
Tp57577_TGAC_v2_gene12038 2.0kb upstream 2.0kb upstream 4503 true Tp57577_TGAC_v2_LG1: 22459898-22464400 Trifolium pratense
Tp57577_TGAC_v2_gene12038 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 22462401-22464400 Trifolium pratense
Tp57577_TGAC_v2_gene12038 2.0kb downstream 2.0kb downstream 4503 true Tp57577_TGAC_v2_LG1: 22457898-22462400 Trifolium pratense
Tp57577_TGAC_v2_gene12038 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 22457898-22459897 Trifolium pratense
Tp57577_TGAC_v2_gene12038 5.0kb upstream 5.0kb upstream 7503 true Tp57577_TGAC_v2_LG1: 22459898-22467400 Trifolium pratense
Tp57577_TGAC_v2_gene12038 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 22462401-22467400 Trifolium pratense
Tp57577_TGAC_v2_gene12038 5.0kb downstream 5.0kb downstream 7503 true Tp57577_TGAC_v2_LG1: 22454898-22462400 Trifolium pratense
Tp57577_TGAC_v2_gene12038 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 22454898-22459897 Trifolium pratense
Tp57577_TGAC_v2_gene12038 10.0kb upstream 10.0kb upstream 12503 true Tp57577_TGAC_v2_LG1: 22459898-22472400 Trifolium pratense
Tp57577_TGAC_v2_gene12038 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 22462401-22472400 Trifolium pratense
Tp57577_TGAC_v2_gene12038 10.0kb downstream 10.0kb downstream 12503 true Tp57577_TGAC_v2_LG1: 22449898-22462400 Trifolium pratense
Tp57577_TGAC_v2_gene12038 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 22449898-22459897 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303246 5265 Fabidae View MSA
124073555 5270 Rosid View MSA
123741575 5271 Pentapetalae View MSA
122793789 5272 Eudicot View MSA
122045087 5273 Angiosperm View MSA
121349766 5274 Embryophyte View MSA
123381435 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain