Gene : Tp57577_TGAC_v2_gene9484 T. pratense v2
Defline:  (1 of 2) PTHR32370:SF6 - ROOT PHOTOTROPISM PROTEIN 3 Genomic Order:  2197
Name:  ? Tp57577_TGAC_v2_gene9484 Secondary Identifier:  ? PAC:35973197
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene9484 0.5kb upstream 0.5kb upstream 4252 true Tp57577_TGAC_v2_LG2: 20953107-20957358 Trifolium pratense
Tp57577_TGAC_v2_gene9484 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG2: 20953107-20953606 Trifolium pratense
Tp57577_TGAC_v2_gene9484 0.5kb downstream 0.5kb downstream 4252 true Tp57577_TGAC_v2_LG2: 20953607-20957858 Trifolium pratense
Tp57577_TGAC_v2_gene9484 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG2: 20957359-20957858 Trifolium pratense
Tp57577_TGAC_v2_gene9484 1.0kb upstream 1.0kb upstream 4752 true Tp57577_TGAC_v2_LG2: 20952607-20957358 Trifolium pratense
Tp57577_TGAC_v2_gene9484 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG2: 20952607-20953606 Trifolium pratense
Tp57577_TGAC_v2_gene9484 1.0kb downstream 1.0kb downstream 4752 true Tp57577_TGAC_v2_LG2: 20953607-20958358 Trifolium pratense
Tp57577_TGAC_v2_gene9484 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG2: 20957359-20958358 Trifolium pratense
Tp57577_TGAC_v2_gene9484 2.0kb upstream 2.0kb upstream 5752 true Tp57577_TGAC_v2_LG2: 20951607-20957358 Trifolium pratense
Tp57577_TGAC_v2_gene9484 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG2: 20951607-20953606 Trifolium pratense
Tp57577_TGAC_v2_gene9484 2.0kb downstream 2.0kb downstream 5752 true Tp57577_TGAC_v2_LG2: 20953607-20959358 Trifolium pratense
Tp57577_TGAC_v2_gene9484 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG2: 20957359-20959358 Trifolium pratense
Tp57577_TGAC_v2_gene9484 5.0kb upstream 5.0kb upstream 8752 true Tp57577_TGAC_v2_LG2: 20948607-20957358 Trifolium pratense
Tp57577_TGAC_v2_gene9484 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG2: 20948607-20953606 Trifolium pratense
Tp57577_TGAC_v2_gene9484 5.0kb downstream 5.0kb downstream 8752 true Tp57577_TGAC_v2_LG2: 20953607-20962358 Trifolium pratense
Tp57577_TGAC_v2_gene9484 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG2: 20957359-20962358 Trifolium pratense
Tp57577_TGAC_v2_gene9484 10.0kb upstream 10.0kb upstream 13752 true Tp57577_TGAC_v2_LG2: 20943607-20957358 Trifolium pratense
Tp57577_TGAC_v2_gene9484 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG2: 20943607-20953606 Trifolium pratense
Tp57577_TGAC_v2_gene9484 10.0kb downstream 10.0kb downstream 13752 true Tp57577_TGAC_v2_LG2: 20953607-20967358 Trifolium pratense
Tp57577_TGAC_v2_gene9484 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG2: 20957359-20967358 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296483 5265 Fabidae View MSA
124063481 5270 Rosid View MSA
123746549 5271 Pentapetalae View MSA
122794613 5272 Eudicot View MSA
122049761 5273 Angiosperm View MSA
121347435 5274 Embryophyte View MSA
123380549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain