Gene : Tp57577_TGAC_v2_gene34727 T. pratense v2
Defline:  (1 of 1) PTHR10091:SF3 - ALDOSE 1-EPIMERASE Genomic Order:  11
Name:  ? Tp57577_TGAC_v2_gene34727 Secondary Identifier:  ? PAC:35985223
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY66-422 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene34727 0.5kb upstream 0.5kb upstream 3467 true Tp57577_TGAC_v2_scaf_629: 101469-104935 Trifolium pratense
Tp57577_TGAC_v2_gene34727 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_629: 104436-104935 Trifolium pratense
Tp57577_TGAC_v2_gene34727 0.5kb downstream 0.5kb downstream 3467 true Tp57577_TGAC_v2_scaf_629: 100969-104435 Trifolium pratense
Tp57577_TGAC_v2_gene34727 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_629: 100969-101468 Trifolium pratense
Tp57577_TGAC_v2_gene34727 1.0kb upstream 1.0kb upstream 3967 true Tp57577_TGAC_v2_scaf_629: 101469-105435 Trifolium pratense
Tp57577_TGAC_v2_gene34727 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_629: 104436-105435 Trifolium pratense
Tp57577_TGAC_v2_gene34727 1.0kb downstream 1.0kb downstream 3967 true Tp57577_TGAC_v2_scaf_629: 100469-104435 Trifolium pratense
Tp57577_TGAC_v2_gene34727 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_629: 100469-101468 Trifolium pratense
Tp57577_TGAC_v2_gene34727 2.0kb upstream 2.0kb upstream 4967 true Tp57577_TGAC_v2_scaf_629: 101469-106435 Trifolium pratense
Tp57577_TGAC_v2_gene34727 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_629: 104436-106435 Trifolium pratense
Tp57577_TGAC_v2_gene34727 2.0kb downstream 2.0kb downstream 4967 true Tp57577_TGAC_v2_scaf_629: 99469-104435 Trifolium pratense
Tp57577_TGAC_v2_gene34727 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_629: 99469-101468 Trifolium pratense
Tp57577_TGAC_v2_gene34727 5.0kb upstream 5.0kb upstream 7967 true Tp57577_TGAC_v2_scaf_629: 101469-109435 Trifolium pratense
Tp57577_TGAC_v2_gene34727 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_629: 104436-109435 Trifolium pratense
Tp57577_TGAC_v2_gene34727 5.0kb downstream 5.0kb downstream 7967 true Tp57577_TGAC_v2_scaf_629: 96469-104435 Trifolium pratense
Tp57577_TGAC_v2_gene34727 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_629: 96469-101468 Trifolium pratense
Tp57577_TGAC_v2_gene34727 10.0kb upstream 10.0kb upstream 12967 true Tp57577_TGAC_v2_scaf_629: 101469-114435 Trifolium pratense
Tp57577_TGAC_v2_gene34727 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_629: 104436-114435 Trifolium pratense
Tp57577_TGAC_v2_gene34727 10.0kb downstream 10.0kb downstream 12967 true Tp57577_TGAC_v2_scaf_629: 91469-104435 Trifolium pratense
Tp57577_TGAC_v2_gene34727 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_629: 91469-101468 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308782 5265 Fabidae View MSA
124062867 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain