Gene : Tp57577_TGAC_v2_gene10159 T. pratense v2
Defline:  (1 of 2) PTHR22807:SF34 - METHYLTRANSFERASE NSUN6-RELATED Genomic Order:  18
Name:  ? Tp57577_TGAC_v2_gene10159 Secondary Identifier:  ? PAC:35963008
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene10159 0.5kb upstream 0.5kb upstream 8149 true Tp57577_TGAC_v2_scaf_539: 126807-134955 Trifolium pratense
Tp57577_TGAC_v2_gene10159 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_539: 134456-134955 Trifolium pratense
Tp57577_TGAC_v2_gene10159 0.5kb downstream 0.5kb downstream 8149 true Tp57577_TGAC_v2_scaf_539: 126307-134455 Trifolium pratense
Tp57577_TGAC_v2_gene10159 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_539: 126307-126806 Trifolium pratense
Tp57577_TGAC_v2_gene10159 1.0kb upstream 1.0kb upstream 8649 true Tp57577_TGAC_v2_scaf_539: 126807-135455 Trifolium pratense
Tp57577_TGAC_v2_gene10159 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_539: 134456-135455 Trifolium pratense
Tp57577_TGAC_v2_gene10159 1.0kb downstream 1.0kb downstream 8649 true Tp57577_TGAC_v2_scaf_539: 125807-134455 Trifolium pratense
Tp57577_TGAC_v2_gene10159 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_539: 125807-126806 Trifolium pratense
Tp57577_TGAC_v2_gene10159 2.0kb upstream 2.0kb upstream 9649 true Tp57577_TGAC_v2_scaf_539: 126807-136455 Trifolium pratense
Tp57577_TGAC_v2_gene10159 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_539: 134456-136455 Trifolium pratense
Tp57577_TGAC_v2_gene10159 2.0kb downstream 2.0kb downstream 9649 true Tp57577_TGAC_v2_scaf_539: 124807-134455 Trifolium pratense
Tp57577_TGAC_v2_gene10159 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_539: 124807-126806 Trifolium pratense
Tp57577_TGAC_v2_gene10159 5.0kb upstream 5.0kb upstream 12649 true Tp57577_TGAC_v2_scaf_539: 126807-139455 Trifolium pratense
Tp57577_TGAC_v2_gene10159 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_539: 134456-139455 Trifolium pratense
Tp57577_TGAC_v2_gene10159 5.0kb downstream 5.0kb downstream 12649 true Tp57577_TGAC_v2_scaf_539: 121807-134455 Trifolium pratense
Tp57577_TGAC_v2_gene10159 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_539: 121807-126806 Trifolium pratense
Tp57577_TGAC_v2_gene10159 10.0kb upstream 10.0kb upstream 17649 true Tp57577_TGAC_v2_scaf_539: 126807-144455 Trifolium pratense
Tp57577_TGAC_v2_gene10159 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_539: 134456-144455 Trifolium pratense
Tp57577_TGAC_v2_gene10159 10.0kb downstream 10.0kb downstream 17649 true Tp57577_TGAC_v2_scaf_539: 116807-134455 Trifolium pratense
Tp57577_TGAC_v2_gene10159 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_539: 116807-126806 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026330 5273 Angiosperm View MSA
122304185 5265 Fabidae View MSA
124064308 5270 Rosid View MSA
123740996 5271 Pentapetalae View MSA
122793735 5272 Eudicot View MSA
121346670 5274 Embryophyte View MSA
123427467 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain