Gene : Tp57577_TGAC_v2_gene20268 T. pratense v2
Defline:  (1 of 3) PF03134//PF12874 - TB2/DP1, HVA22 family (TB2_DP1_HVA22) // Zinc-finger of C2H2 type (zf-met) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene20268 Secondary Identifier:  ? PAC:35962965
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene20268 0.5kb upstream 0.5kb upstream 5340 true Tp57577_TGAC_v2_scaf_2019: 3129-8468 Trifolium pratense
Tp57577_TGAC_v2_gene20268 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_2019: 7969-8468 Trifolium pratense
Tp57577_TGAC_v2_gene20268 0.5kb downstream 0.5kb downstream 5340 true Tp57577_TGAC_v2_scaf_2019: 2629-7968 Trifolium pratense
Tp57577_TGAC_v2_gene20268 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_2019: 2629-3128 Trifolium pratense
Tp57577_TGAC_v2_gene20268 1.0kb upstream 1.0kb upstream 5840 true Tp57577_TGAC_v2_scaf_2019: 3129-8968 Trifolium pratense
Tp57577_TGAC_v2_gene20268 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_2019: 7969-8968 Trifolium pratense
Tp57577_TGAC_v2_gene20268 1.0kb downstream 1.0kb downstream 5840 true Tp57577_TGAC_v2_scaf_2019: 2129-7968 Trifolium pratense
Tp57577_TGAC_v2_gene20268 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_2019: 2129-3128 Trifolium pratense
Tp57577_TGAC_v2_gene20268 2.0kb upstream 2.0kb upstream 5857 true Tp57577_TGAC_v2_scaf_2019: 3129-8985 Trifolium pratense
Tp57577_TGAC_v2_gene20268 2.0kb upstream 2.0kb upstream 1017 false Tp57577_TGAC_v2_scaf_2019: 7969-8985 Trifolium pratense
Tp57577_TGAC_v2_gene20268 2.0kb downstream 2.0kb downstream 6840 true Tp57577_TGAC_v2_scaf_2019: 1129-7968 Trifolium pratense
Tp57577_TGAC_v2_gene20268 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_2019: 1129-3128 Trifolium pratense
Tp57577_TGAC_v2_gene20268 5.0kb upstream 5.0kb upstream 5857 true Tp57577_TGAC_v2_scaf_2019: 3129-8985 Trifolium pratense
Tp57577_TGAC_v2_gene20268 5.0kb upstream 5.0kb upstream 1017 false Tp57577_TGAC_v2_scaf_2019: 7969-8985 Trifolium pratense
Tp57577_TGAC_v2_gene20268 5.0kb downstream 5.0kb downstream 7968 true Tp57577_TGAC_v2_scaf_2019: 1-7968 Trifolium pratense
Tp57577_TGAC_v2_gene20268 5.0kb downstream 5.0kb downstream 3128 false Tp57577_TGAC_v2_scaf_2019: 1-3128 Trifolium pratense
Tp57577_TGAC_v2_gene20268 10.0kb upstream 10.0kb upstream 5857 true Tp57577_TGAC_v2_scaf_2019: 3129-8985 Trifolium pratense
Tp57577_TGAC_v2_gene20268 10.0kb upstream 10.0kb upstream 1017 false Tp57577_TGAC_v2_scaf_2019: 7969-8985 Trifolium pratense
Tp57577_TGAC_v2_gene20268 10.0kb downstream 10.0kb downstream 7968 true Tp57577_TGAC_v2_scaf_2019: 1-7968 Trifolium pratense
Tp57577_TGAC_v2_gene20268 10.0kb downstream 10.0kb downstream 3128 false Tp57577_TGAC_v2_scaf_2019: 1-3128 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311964 5265 Fabidae View MSA
124074619 5270 Rosid View MSA
123753411 5271 Pentapetalae View MSA
122797924 5272 Eudicot View MSA
122050358 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain