Gene : Tp57577_TGAC_v2_gene19653 T. pratense v2
Defline:  (1 of 1) PTHR11136:SF7 - FOLYLPOLYGLUTAMATE SYNTHASE Genomic Order:  21
Name:  ? Tp57577_TGAC_v2_gene19653 Secondary Identifier:  ? PAC:35992079
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-2161 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene19653 0.5kb upstream 0.5kb upstream 13563 true Tp57577_TGAC_v2_scaf_323: 159363-172925 Trifolium pratense
Tp57577_TGAC_v2_gene19653 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_323: 172426-172925 Trifolium pratense
Tp57577_TGAC_v2_gene19653 0.5kb downstream 0.5kb downstream 13563 true Tp57577_TGAC_v2_scaf_323: 158863-172425 Trifolium pratense
Tp57577_TGAC_v2_gene19653 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_323: 158863-159362 Trifolium pratense
Tp57577_TGAC_v2_gene19653 1.0kb upstream 1.0kb upstream 14063 true Tp57577_TGAC_v2_scaf_323: 159363-173425 Trifolium pratense
Tp57577_TGAC_v2_gene19653 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_323: 172426-173425 Trifolium pratense
Tp57577_TGAC_v2_gene19653 1.0kb downstream 1.0kb downstream 14063 true Tp57577_TGAC_v2_scaf_323: 158363-172425 Trifolium pratense
Tp57577_TGAC_v2_gene19653 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_323: 158363-159362 Trifolium pratense
Tp57577_TGAC_v2_gene19653 2.0kb upstream 2.0kb upstream 15063 true Tp57577_TGAC_v2_scaf_323: 159363-174425 Trifolium pratense
Tp57577_TGAC_v2_gene19653 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_323: 172426-174425 Trifolium pratense
Tp57577_TGAC_v2_gene19653 2.0kb downstream 2.0kb downstream 15063 true Tp57577_TGAC_v2_scaf_323: 157363-172425 Trifolium pratense
Tp57577_TGAC_v2_gene19653 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_323: 157363-159362 Trifolium pratense
Tp57577_TGAC_v2_gene19653 5.0kb upstream 5.0kb upstream 18063 true Tp57577_TGAC_v2_scaf_323: 159363-177425 Trifolium pratense
Tp57577_TGAC_v2_gene19653 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_323: 172426-177425 Trifolium pratense
Tp57577_TGAC_v2_gene19653 5.0kb downstream 5.0kb downstream 18063 true Tp57577_TGAC_v2_scaf_323: 154363-172425 Trifolium pratense
Tp57577_TGAC_v2_gene19653 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_323: 154363-159362 Trifolium pratense
Tp57577_TGAC_v2_gene19653 10.0kb upstream 10.0kb upstream 23063 true Tp57577_TGAC_v2_scaf_323: 159363-182425 Trifolium pratense
Tp57577_TGAC_v2_gene19653 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_323: 172426-182425 Trifolium pratense
Tp57577_TGAC_v2_gene19653 10.0kb downstream 10.0kb downstream 23063 true Tp57577_TGAC_v2_scaf_323: 149363-172425 Trifolium pratense
Tp57577_TGAC_v2_gene19653 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_323: 149363-159362 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307230 5265 Fabidae View MSA
124068713 5270 Rosid View MSA
123740446 5271 Pentapetalae View MSA
122786147 5272 Eudicot View MSA
122044962 5273 Angiosperm View MSA
121349297 5274 Embryophyte View MSA
123426614 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain