Gene : Tp57577_TGAC_v2_gene13674 T. pratense v2
Defline:  (1 of 1) PTHR35703:SF1 - INACTIVE HEME OXYGENASE 2, CHLOROPLASTIC-RELATED Genomic Order:  2877
Name:  ? Tp57577_TGAC_v2_gene13674 Secondary Identifier:  ? PAC:35978076
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5874 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13674 0.5kb upstream 0.5kb upstream 4675 true Tp57577_TGAC_v2_LG1: 24152363-24157037 Trifolium pratense
Tp57577_TGAC_v2_gene13674 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 24152363-24152862 Trifolium pratense
Tp57577_TGAC_v2_gene13674 0.5kb downstream 0.5kb downstream 4675 true Tp57577_TGAC_v2_LG1: 24152863-24157537 Trifolium pratense
Tp57577_TGAC_v2_gene13674 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 24157038-24157537 Trifolium pratense
Tp57577_TGAC_v2_gene13674 1.0kb upstream 1.0kb upstream 5175 true Tp57577_TGAC_v2_LG1: 24151863-24157037 Trifolium pratense
Tp57577_TGAC_v2_gene13674 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 24151863-24152862 Trifolium pratense
Tp57577_TGAC_v2_gene13674 1.0kb downstream 1.0kb downstream 5175 true Tp57577_TGAC_v2_LG1: 24152863-24158037 Trifolium pratense
Tp57577_TGAC_v2_gene13674 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 24157038-24158037 Trifolium pratense
Tp57577_TGAC_v2_gene13674 2.0kb upstream 2.0kb upstream 6175 true Tp57577_TGAC_v2_LG1: 24150863-24157037 Trifolium pratense
Tp57577_TGAC_v2_gene13674 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 24150863-24152862 Trifolium pratense
Tp57577_TGAC_v2_gene13674 2.0kb downstream 2.0kb downstream 6175 true Tp57577_TGAC_v2_LG1: 24152863-24159037 Trifolium pratense
Tp57577_TGAC_v2_gene13674 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 24157038-24159037 Trifolium pratense
Tp57577_TGAC_v2_gene13674 5.0kb upstream 5.0kb upstream 9175 true Tp57577_TGAC_v2_LG1: 24147863-24157037 Trifolium pratense
Tp57577_TGAC_v2_gene13674 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 24147863-24152862 Trifolium pratense
Tp57577_TGAC_v2_gene13674 5.0kb downstream 5.0kb downstream 9175 true Tp57577_TGAC_v2_LG1: 24152863-24162037 Trifolium pratense
Tp57577_TGAC_v2_gene13674 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 24157038-24162037 Trifolium pratense
Tp57577_TGAC_v2_gene13674 10.0kb upstream 10.0kb upstream 14175 true Tp57577_TGAC_v2_LG1: 24142863-24157037 Trifolium pratense
Tp57577_TGAC_v2_gene13674 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 24142863-24152862 Trifolium pratense
Tp57577_TGAC_v2_gene13674 10.0kb downstream 10.0kb downstream 14175 true Tp57577_TGAC_v2_LG1: 24152863-24167037 Trifolium pratense
Tp57577_TGAC_v2_gene13674 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 24157038-24167037 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310013 5265 Fabidae View MSA
124063078 5270 Rosid View MSA
123741198 5271 Pentapetalae View MSA
122793273 5272 Eudicot View MSA
122045580 5273 Angiosperm View MSA
121310469 5274 Embryophyte View MSA
123347942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain