Gene : Tp57577_TGAC_v2_gene35227 T. pratense v2
Defline:  (1 of 106) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene35227 Secondary Identifier:  ? PAC:35960679
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene35227 0.5kb upstream 0.5kb upstream 721 true Tp57577_TGAC_v2_scaf_29796: 1-721 Trifolium pratense
Tp57577_TGAC_v2_gene35227 0.5kb upstream 0.5kb upstream 1 false Tp57577_TGAC_v2_scaf_29796: 1-1 Trifolium pratense
Tp57577_TGAC_v2_gene35227 0.5kb downstream 0.5kb downstream 722 true Tp57577_TGAC_v2_scaf_29796: 2-723 Trifolium pratense
Tp57577_TGAC_v2_gene35227 0.5kb downstream 0.5kb downstream 2 false Tp57577_TGAC_v2_scaf_29796: 722-723 Trifolium pratense
Tp57577_TGAC_v2_gene35227 1.0kb upstream 1.0kb upstream 721 true Tp57577_TGAC_v2_scaf_29796: 1-721 Trifolium pratense
Tp57577_TGAC_v2_gene35227 1.0kb upstream 1.0kb upstream 1 false Tp57577_TGAC_v2_scaf_29796: 1-1 Trifolium pratense
Tp57577_TGAC_v2_gene35227 1.0kb downstream 1.0kb downstream 722 true Tp57577_TGAC_v2_scaf_29796: 2-723 Trifolium pratense
Tp57577_TGAC_v2_gene35227 1.0kb downstream 1.0kb downstream 2 false Tp57577_TGAC_v2_scaf_29796: 722-723 Trifolium pratense
Tp57577_TGAC_v2_gene35227 2.0kb upstream 2.0kb upstream 721 true Tp57577_TGAC_v2_scaf_29796: 1-721 Trifolium pratense
Tp57577_TGAC_v2_gene35227 2.0kb upstream 2.0kb upstream 1 false Tp57577_TGAC_v2_scaf_29796: 1-1 Trifolium pratense
Tp57577_TGAC_v2_gene35227 2.0kb downstream 2.0kb downstream 722 true Tp57577_TGAC_v2_scaf_29796: 2-723 Trifolium pratense
Tp57577_TGAC_v2_gene35227 2.0kb downstream 2.0kb downstream 2 false Tp57577_TGAC_v2_scaf_29796: 722-723 Trifolium pratense
Tp57577_TGAC_v2_gene35227 5.0kb upstream 5.0kb upstream 721 true Tp57577_TGAC_v2_scaf_29796: 1-721 Trifolium pratense
Tp57577_TGAC_v2_gene35227 5.0kb upstream 5.0kb upstream 1 false Tp57577_TGAC_v2_scaf_29796: 1-1 Trifolium pratense
Tp57577_TGAC_v2_gene35227 5.0kb downstream 5.0kb downstream 722 true Tp57577_TGAC_v2_scaf_29796: 2-723 Trifolium pratense
Tp57577_TGAC_v2_gene35227 5.0kb downstream 5.0kb downstream 2 false Tp57577_TGAC_v2_scaf_29796: 722-723 Trifolium pratense
Tp57577_TGAC_v2_gene35227 10.0kb upstream 10.0kb upstream 721 true Tp57577_TGAC_v2_scaf_29796: 1-721 Trifolium pratense
Tp57577_TGAC_v2_gene35227 10.0kb upstream 10.0kb upstream 1 false Tp57577_TGAC_v2_scaf_29796: 1-1 Trifolium pratense
Tp57577_TGAC_v2_gene35227 10.0kb downstream 10.0kb downstream 722 true Tp57577_TGAC_v2_scaf_29796: 2-723 Trifolium pratense
Tp57577_TGAC_v2_gene35227 10.0kb downstream 10.0kb downstream 2 false Tp57577_TGAC_v2_scaf_29796: 722-723 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298158 5265 Fabidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain