Gene : Tp57577_TGAC_v2_gene14011 T. pratense v2
Defline:  (1 of 1) PTHR11946:SF89 - METHIONYL-TRNA SYNTHETASE Genomic Order:  1432
Name:  ? Tp57577_TGAC_v2_gene14011 Secondary Identifier:  ? PAC:35980892
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRNA-CHARGING-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene14011 0.5kb upstream 0.5kb upstream 6451 true Tp57577_TGAC_v2_LG1: 11847090-11853540 Trifolium pratense
Tp57577_TGAC_v2_gene14011 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 11847090-11847589 Trifolium pratense
Tp57577_TGAC_v2_gene14011 0.5kb downstream 0.5kb downstream 6451 true Tp57577_TGAC_v2_LG1: 11847590-11854040 Trifolium pratense
Tp57577_TGAC_v2_gene14011 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 11853541-11854040 Trifolium pratense
Tp57577_TGAC_v2_gene14011 1.0kb upstream 1.0kb upstream 6951 true Tp57577_TGAC_v2_LG1: 11846590-11853540 Trifolium pratense
Tp57577_TGAC_v2_gene14011 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 11846590-11847589 Trifolium pratense
Tp57577_TGAC_v2_gene14011 1.0kb downstream 1.0kb downstream 6951 true Tp57577_TGAC_v2_LG1: 11847590-11854540 Trifolium pratense
Tp57577_TGAC_v2_gene14011 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 11853541-11854540 Trifolium pratense
Tp57577_TGAC_v2_gene14011 2.0kb upstream 2.0kb upstream 7951 true Tp57577_TGAC_v2_LG1: 11845590-11853540 Trifolium pratense
Tp57577_TGAC_v2_gene14011 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 11845590-11847589 Trifolium pratense
Tp57577_TGAC_v2_gene14011 2.0kb downstream 2.0kb downstream 7951 true Tp57577_TGAC_v2_LG1: 11847590-11855540 Trifolium pratense
Tp57577_TGAC_v2_gene14011 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 11853541-11855540 Trifolium pratense
Tp57577_TGAC_v2_gene14011 5.0kb upstream 5.0kb upstream 10951 true Tp57577_TGAC_v2_LG1: 11842590-11853540 Trifolium pratense
Tp57577_TGAC_v2_gene14011 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 11842590-11847589 Trifolium pratense
Tp57577_TGAC_v2_gene14011 5.0kb downstream 5.0kb downstream 10951 true Tp57577_TGAC_v2_LG1: 11847590-11858540 Trifolium pratense
Tp57577_TGAC_v2_gene14011 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 11853541-11858540 Trifolium pratense
Tp57577_TGAC_v2_gene14011 10.0kb upstream 10.0kb upstream 15951 true Tp57577_TGAC_v2_LG1: 11837590-11853540 Trifolium pratense
Tp57577_TGAC_v2_gene14011 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 11837590-11847589 Trifolium pratense
Tp57577_TGAC_v2_gene14011 10.0kb downstream 10.0kb downstream 15951 true Tp57577_TGAC_v2_LG1: 11847590-11863540 Trifolium pratense
Tp57577_TGAC_v2_gene14011 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 11853541-11863540 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303367 5265 Fabidae View MSA
124065458 5270 Rosid View MSA
123752968 5271 Pentapetalae View MSA
122787831 5272 Eudicot View MSA
122046373 5273 Angiosperm View MSA
121347151 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain