Gene : Tp57577_TGAC_v2_gene8749 T. pratense v2
Defline:  (1 of 216) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  5
Name:  ? Tp57577_TGAC_v2_gene8749 Secondary Identifier:  ? PAC:35967649
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8749 0.5kb upstream 0.5kb upstream 2441 true Tp57577_TGAC_v2_scaf_513: 18486-20926 Trifolium pratense
Tp57577_TGAC_v2_gene8749 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_513: 18486-18985 Trifolium pratense
Tp57577_TGAC_v2_gene8749 0.5kb downstream 0.5kb downstream 2441 true Tp57577_TGAC_v2_scaf_513: 18986-21426 Trifolium pratense
Tp57577_TGAC_v2_gene8749 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_513: 20927-21426 Trifolium pratense
Tp57577_TGAC_v2_gene8749 1.0kb upstream 1.0kb upstream 2941 true Tp57577_TGAC_v2_scaf_513: 17986-20926 Trifolium pratense
Tp57577_TGAC_v2_gene8749 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_513: 17986-18985 Trifolium pratense
Tp57577_TGAC_v2_gene8749 1.0kb downstream 1.0kb downstream 2941 true Tp57577_TGAC_v2_scaf_513: 18986-21926 Trifolium pratense
Tp57577_TGAC_v2_gene8749 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_513: 20927-21926 Trifolium pratense
Tp57577_TGAC_v2_gene8749 2.0kb upstream 2.0kb upstream 3941 true Tp57577_TGAC_v2_scaf_513: 16986-20926 Trifolium pratense
Tp57577_TGAC_v2_gene8749 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_513: 16986-18985 Trifolium pratense
Tp57577_TGAC_v2_gene8749 2.0kb downstream 2.0kb downstream 3941 true Tp57577_TGAC_v2_scaf_513: 18986-22926 Trifolium pratense
Tp57577_TGAC_v2_gene8749 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_513: 20927-22926 Trifolium pratense
Tp57577_TGAC_v2_gene8749 5.0kb upstream 5.0kb upstream 6941 true Tp57577_TGAC_v2_scaf_513: 13986-20926 Trifolium pratense
Tp57577_TGAC_v2_gene8749 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_513: 13986-18985 Trifolium pratense
Tp57577_TGAC_v2_gene8749 5.0kb downstream 5.0kb downstream 6941 true Tp57577_TGAC_v2_scaf_513: 18986-25926 Trifolium pratense
Tp57577_TGAC_v2_gene8749 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_513: 20927-25926 Trifolium pratense
Tp57577_TGAC_v2_gene8749 10.0kb upstream 10.0kb upstream 11941 true Tp57577_TGAC_v2_scaf_513: 8986-20926 Trifolium pratense
Tp57577_TGAC_v2_gene8749 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_513: 8986-18985 Trifolium pratense
Tp57577_TGAC_v2_gene8749 10.0kb downstream 10.0kb downstream 11941 true Tp57577_TGAC_v2_scaf_513: 18986-30926 Trifolium pratense
Tp57577_TGAC_v2_gene8749 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_513: 20927-30926 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309091 5265 Fabidae View MSA
124073519 5270 Rosid View MSA
123739768 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain