Gene : Tp57577_TGAC_v2_gene13856 T. pratense v2
Defline:  (1 of 2) PTHR22814//PTHR22814:SF150 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  255
Name:  ? Tp57577_TGAC_v2_gene13856 Secondary Identifier:  ? PAC:35978351
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene13856 0.5kb upstream 0.5kb upstream 3125 true Tp57577_TGAC_v2_LG1: 1862835-1865959 Trifolium pratense
Tp57577_TGAC_v2_gene13856 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 1862835-1863334 Trifolium pratense
Tp57577_TGAC_v2_gene13856 0.5kb downstream 0.5kb downstream 3125 true Tp57577_TGAC_v2_LG1: 1863335-1866459 Trifolium pratense
Tp57577_TGAC_v2_gene13856 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 1865960-1866459 Trifolium pratense
Tp57577_TGAC_v2_gene13856 1.0kb upstream 1.0kb upstream 3625 true Tp57577_TGAC_v2_LG1: 1862335-1865959 Trifolium pratense
Tp57577_TGAC_v2_gene13856 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 1862335-1863334 Trifolium pratense
Tp57577_TGAC_v2_gene13856 1.0kb downstream 1.0kb downstream 3625 true Tp57577_TGAC_v2_LG1: 1863335-1866959 Trifolium pratense
Tp57577_TGAC_v2_gene13856 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 1865960-1866959 Trifolium pratense
Tp57577_TGAC_v2_gene13856 2.0kb upstream 2.0kb upstream 4625 true Tp57577_TGAC_v2_LG1: 1861335-1865959 Trifolium pratense
Tp57577_TGAC_v2_gene13856 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 1861335-1863334 Trifolium pratense
Tp57577_TGAC_v2_gene13856 2.0kb downstream 2.0kb downstream 4625 true Tp57577_TGAC_v2_LG1: 1863335-1867959 Trifolium pratense
Tp57577_TGAC_v2_gene13856 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 1865960-1867959 Trifolium pratense
Tp57577_TGAC_v2_gene13856 5.0kb upstream 5.0kb upstream 7625 true Tp57577_TGAC_v2_LG1: 1858335-1865959 Trifolium pratense
Tp57577_TGAC_v2_gene13856 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 1858335-1863334 Trifolium pratense
Tp57577_TGAC_v2_gene13856 5.0kb downstream 5.0kb downstream 7625 true Tp57577_TGAC_v2_LG1: 1863335-1870959 Trifolium pratense
Tp57577_TGAC_v2_gene13856 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 1865960-1870959 Trifolium pratense
Tp57577_TGAC_v2_gene13856 10.0kb upstream 10.0kb upstream 12625 true Tp57577_TGAC_v2_LG1: 1853335-1865959 Trifolium pratense
Tp57577_TGAC_v2_gene13856 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 1853335-1863334 Trifolium pratense
Tp57577_TGAC_v2_gene13856 10.0kb downstream 10.0kb downstream 12625 true Tp57577_TGAC_v2_LG1: 1863335-1875959 Trifolium pratense
Tp57577_TGAC_v2_gene13856 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 1865960-1875959 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308724 5265 Fabidae View MSA
124063089 5270 Rosid View MSA
123750327 5271 Pentapetalae View MSA
122795966 5272 Eudicot View MSA
122049430 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain