Gene : Tp57577_TGAC_v2_gene14004 T. pratense v2
Defline:  (1 of 1) KOG0131//KOG4210 - Splicing factor 3b, subunit 4 // Nuclear localization sequence binding protein Genomic Order:  1426
Name:  ? Tp57577_TGAC_v2_gene14004 Secondary Identifier:  ? PAC:35980795
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene14004 0.5kb upstream 0.5kb upstream 3917 true Tp57577_TGAC_v2_LG1: 11798870-11802786 Trifolium pratense
Tp57577_TGAC_v2_gene14004 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 11798870-11799369 Trifolium pratense
Tp57577_TGAC_v2_gene14004 0.5kb downstream 0.5kb downstream 3917 true Tp57577_TGAC_v2_LG1: 11799370-11803286 Trifolium pratense
Tp57577_TGAC_v2_gene14004 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 11802787-11803286 Trifolium pratense
Tp57577_TGAC_v2_gene14004 1.0kb upstream 1.0kb upstream 4417 true Tp57577_TGAC_v2_LG1: 11798370-11802786 Trifolium pratense
Tp57577_TGAC_v2_gene14004 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 11798370-11799369 Trifolium pratense
Tp57577_TGAC_v2_gene14004 1.0kb downstream 1.0kb downstream 4417 true Tp57577_TGAC_v2_LG1: 11799370-11803786 Trifolium pratense
Tp57577_TGAC_v2_gene14004 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 11802787-11803786 Trifolium pratense
Tp57577_TGAC_v2_gene14004 2.0kb upstream 2.0kb upstream 5417 true Tp57577_TGAC_v2_LG1: 11797370-11802786 Trifolium pratense
Tp57577_TGAC_v2_gene14004 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 11797370-11799369 Trifolium pratense
Tp57577_TGAC_v2_gene14004 2.0kb downstream 2.0kb downstream 5417 true Tp57577_TGAC_v2_LG1: 11799370-11804786 Trifolium pratense
Tp57577_TGAC_v2_gene14004 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 11802787-11804786 Trifolium pratense
Tp57577_TGAC_v2_gene14004 5.0kb upstream 5.0kb upstream 8417 true Tp57577_TGAC_v2_LG1: 11794370-11802786 Trifolium pratense
Tp57577_TGAC_v2_gene14004 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 11794370-11799369 Trifolium pratense
Tp57577_TGAC_v2_gene14004 5.0kb downstream 5.0kb downstream 8417 true Tp57577_TGAC_v2_LG1: 11799370-11807786 Trifolium pratense
Tp57577_TGAC_v2_gene14004 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 11802787-11807786 Trifolium pratense
Tp57577_TGAC_v2_gene14004 10.0kb upstream 10.0kb upstream 13417 true Tp57577_TGAC_v2_LG1: 11789370-11802786 Trifolium pratense
Tp57577_TGAC_v2_gene14004 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 11789370-11799369 Trifolium pratense
Tp57577_TGAC_v2_gene14004 10.0kb downstream 10.0kb downstream 13417 true Tp57577_TGAC_v2_LG1: 11799370-11812786 Trifolium pratense
Tp57577_TGAC_v2_gene14004 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 11802787-11812786 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311286 5265 Fabidae View MSA
124069375 5270 Rosid View MSA
123748314 5271 Pentapetalae View MSA
122791065 5272 Eudicot View MSA
122048889 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348554 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain