Gene : Tp57577_TGAC_v2_gene1806 T. pratense v2
Defline:  (1 of 1) PTHR24067//PTHR24067:SF121 - UBIQUITIN-CONJUGATING ENZYME E2 // SUBFAMILY NOT NAMED Genomic Order:  1853
Name:  ? Tp57577_TGAC_v2_gene1806 Secondary Identifier:  ? PAC:35978726
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-7511 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene1806 0.5kb upstream 0.5kb upstream 3660 true Tp57577_TGAC_v2_LG1: 15476299-15479958 Trifolium pratense
Tp57577_TGAC_v2_gene1806 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 15479459-15479958 Trifolium pratense
Tp57577_TGAC_v2_gene1806 0.5kb downstream 0.5kb downstream 3660 true Tp57577_TGAC_v2_LG1: 15475799-15479458 Trifolium pratense
Tp57577_TGAC_v2_gene1806 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 15475799-15476298 Trifolium pratense
Tp57577_TGAC_v2_gene1806 1.0kb upstream 1.0kb upstream 4160 true Tp57577_TGAC_v2_LG1: 15476299-15480458 Trifolium pratense
Tp57577_TGAC_v2_gene1806 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 15479459-15480458 Trifolium pratense
Tp57577_TGAC_v2_gene1806 1.0kb downstream 1.0kb downstream 4160 true Tp57577_TGAC_v2_LG1: 15475299-15479458 Trifolium pratense
Tp57577_TGAC_v2_gene1806 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 15475299-15476298 Trifolium pratense
Tp57577_TGAC_v2_gene1806 2.0kb upstream 2.0kb upstream 5160 true Tp57577_TGAC_v2_LG1: 15476299-15481458 Trifolium pratense
Tp57577_TGAC_v2_gene1806 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 15479459-15481458 Trifolium pratense
Tp57577_TGAC_v2_gene1806 2.0kb downstream 2.0kb downstream 5160 true Tp57577_TGAC_v2_LG1: 15474299-15479458 Trifolium pratense
Tp57577_TGAC_v2_gene1806 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 15474299-15476298 Trifolium pratense
Tp57577_TGAC_v2_gene1806 5.0kb upstream 5.0kb upstream 8160 true Tp57577_TGAC_v2_LG1: 15476299-15484458 Trifolium pratense
Tp57577_TGAC_v2_gene1806 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 15479459-15484458 Trifolium pratense
Tp57577_TGAC_v2_gene1806 5.0kb downstream 5.0kb downstream 8160 true Tp57577_TGAC_v2_LG1: 15471299-15479458 Trifolium pratense
Tp57577_TGAC_v2_gene1806 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 15471299-15476298 Trifolium pratense
Tp57577_TGAC_v2_gene1806 10.0kb upstream 10.0kb upstream 13160 true Tp57577_TGAC_v2_LG1: 15476299-15489458 Trifolium pratense
Tp57577_TGAC_v2_gene1806 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 15479459-15489458 Trifolium pratense
Tp57577_TGAC_v2_gene1806 10.0kb downstream 10.0kb downstream 13160 true Tp57577_TGAC_v2_LG1: 15466299-15479458 Trifolium pratense
Tp57577_TGAC_v2_gene1806 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 15466299-15476298 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304835 5265 Fabidae View MSA
124070103 5270 Rosid View MSA
123742305 5271 Pentapetalae View MSA
122795620 5272 Eudicot View MSA
122049556 5273 Angiosperm View MSA
121349130 5274 Embryophyte View MSA
123424862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain