Gene : Tp57577_TGAC_v2_gene28113 T. pratense v2
Defline:  (1 of 3) K15728 - phosphatidate phosphatase LPIN (LPIN) Genomic Order:  4
Name:  ? Tp57577_TGAC_v2_gene28113 Secondary Identifier:  ? PAC:35961004
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense TRIGLSYN-PWY Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28113 0.5kb upstream 0.5kb upstream 8296 true Tp57577_TGAC_v2_scaf_894: 39500-47795 Trifolium pratense
Tp57577_TGAC_v2_gene28113 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_894: 47296-47795 Trifolium pratense
Tp57577_TGAC_v2_gene28113 0.5kb downstream 0.5kb downstream 8296 true Tp57577_TGAC_v2_scaf_894: 39000-47295 Trifolium pratense
Tp57577_TGAC_v2_gene28113 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_894: 39000-39499 Trifolium pratense
Tp57577_TGAC_v2_gene28113 1.0kb upstream 1.0kb upstream 8796 true Tp57577_TGAC_v2_scaf_894: 39500-48295 Trifolium pratense
Tp57577_TGAC_v2_gene28113 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_894: 47296-48295 Trifolium pratense
Tp57577_TGAC_v2_gene28113 1.0kb downstream 1.0kb downstream 8796 true Tp57577_TGAC_v2_scaf_894: 38500-47295 Trifolium pratense
Tp57577_TGAC_v2_gene28113 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_894: 38500-39499 Trifolium pratense
Tp57577_TGAC_v2_gene28113 2.0kb upstream 2.0kb upstream 9796 true Tp57577_TGAC_v2_scaf_894: 39500-49295 Trifolium pratense
Tp57577_TGAC_v2_gene28113 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_894: 47296-49295 Trifolium pratense
Tp57577_TGAC_v2_gene28113 2.0kb downstream 2.0kb downstream 9796 true Tp57577_TGAC_v2_scaf_894: 37500-47295 Trifolium pratense
Tp57577_TGAC_v2_gene28113 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_894: 37500-39499 Trifolium pratense
Tp57577_TGAC_v2_gene28113 5.0kb upstream 5.0kb upstream 12796 true Tp57577_TGAC_v2_scaf_894: 39500-52295 Trifolium pratense
Tp57577_TGAC_v2_gene28113 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_894: 47296-52295 Trifolium pratense
Tp57577_TGAC_v2_gene28113 5.0kb downstream 5.0kb downstream 12796 true Tp57577_TGAC_v2_scaf_894: 34500-47295 Trifolium pratense
Tp57577_TGAC_v2_gene28113 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_894: 34500-39499 Trifolium pratense
Tp57577_TGAC_v2_gene28113 10.0kb upstream 10.0kb upstream 17796 true Tp57577_TGAC_v2_scaf_894: 39500-57295 Trifolium pratense
Tp57577_TGAC_v2_gene28113 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_894: 47296-57295 Trifolium pratense
Tp57577_TGAC_v2_gene28113 10.0kb downstream 10.0kb downstream 17796 true Tp57577_TGAC_v2_scaf_894: 29500-47295 Trifolium pratense
Tp57577_TGAC_v2_gene28113 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_894: 29500-39499 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304460 5265 Fabidae View MSA
124065604 5270 Rosid View MSA
123741487 5271 Pentapetalae View MSA
122792824 5272 Eudicot View MSA
122048354 5273 Angiosperm View MSA
121350822 5274 Embryophyte View MSA
123381897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain