Gene : Tp57577_TGAC_v2_gene8122 T. pratense v2
Defline:  (1 of 1) PTHR11695:SF395 - ALCOHOL DEHYDROGENASE-LIKE 3-RELATED Genomic Order:  20
Name:  ? Tp57577_TGAC_v2_gene8122 Secondary Identifier:  ? PAC:35983064
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-5486 Trifolium pratense pathologic  
Tpratense PWY-6333 Trifolium pratense pathologic  
Tpratense PWY66-21 Trifolium pratense pathologic  
Tpratense PWY66-389 Trifolium pratense pathologic  
Tpratense PWY-6802 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene8122 0.5kb upstream 0.5kb upstream 9212 true Tp57577_TGAC_v2_scaf_282: 200246-209457 Trifolium pratense
Tp57577_TGAC_v2_gene8122 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_282: 200246-200745 Trifolium pratense
Tp57577_TGAC_v2_gene8122 0.5kb downstream 0.5kb downstream 9212 true Tp57577_TGAC_v2_scaf_282: 200746-209957 Trifolium pratense
Tp57577_TGAC_v2_gene8122 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_282: 209458-209957 Trifolium pratense
Tp57577_TGAC_v2_gene8122 1.0kb upstream 1.0kb upstream 9712 true Tp57577_TGAC_v2_scaf_282: 199746-209457 Trifolium pratense
Tp57577_TGAC_v2_gene8122 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_282: 199746-200745 Trifolium pratense
Tp57577_TGAC_v2_gene8122 1.0kb downstream 1.0kb downstream 9712 true Tp57577_TGAC_v2_scaf_282: 200746-210457 Trifolium pratense
Tp57577_TGAC_v2_gene8122 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_282: 209458-210457 Trifolium pratense
Tp57577_TGAC_v2_gene8122 2.0kb upstream 2.0kb upstream 10712 true Tp57577_TGAC_v2_scaf_282: 198746-209457 Trifolium pratense
Tp57577_TGAC_v2_gene8122 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_282: 198746-200745 Trifolium pratense
Tp57577_TGAC_v2_gene8122 2.0kb downstream 2.0kb downstream 10712 true Tp57577_TGAC_v2_scaf_282: 200746-211457 Trifolium pratense
Tp57577_TGAC_v2_gene8122 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_282: 209458-211457 Trifolium pratense
Tp57577_TGAC_v2_gene8122 5.0kb upstream 5.0kb upstream 13712 true Tp57577_TGAC_v2_scaf_282: 195746-209457 Trifolium pratense
Tp57577_TGAC_v2_gene8122 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_282: 195746-200745 Trifolium pratense
Tp57577_TGAC_v2_gene8122 5.0kb downstream 5.0kb downstream 13712 true Tp57577_TGAC_v2_scaf_282: 200746-214457 Trifolium pratense
Tp57577_TGAC_v2_gene8122 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_282: 209458-214457 Trifolium pratense
Tp57577_TGAC_v2_gene8122 10.0kb upstream 10.0kb upstream 18712 true Tp57577_TGAC_v2_scaf_282: 190746-209457 Trifolium pratense
Tp57577_TGAC_v2_gene8122 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_282: 190746-200745 Trifolium pratense
Tp57577_TGAC_v2_gene8122 10.0kb downstream 10.0kb downstream 18712 true Tp57577_TGAC_v2_scaf_282: 200746-219457 Trifolium pratense
Tp57577_TGAC_v2_gene8122 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_282: 209458-219457 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300570 5265 Fabidae View MSA
124061215 5270 Rosid View MSA
123741103 5271 Pentapetalae View MSA
122790051 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain