Gene : Tp57577_TGAC_v2_gene16957 T. pratense v2
Defline:  (1 of 2) PTHR14859 - CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR Genomic Order:  575
Name:  ? Tp57577_TGAC_v2_gene16957 Secondary Identifier:  ? PAC:35978805
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16957 0.5kb upstream 0.5kb upstream 4363 true Tp57577_TGAC_v2_LG1: 4382228-4386590 Trifolium pratense
Tp57577_TGAC_v2_gene16957 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 4382228-4382727 Trifolium pratense
Tp57577_TGAC_v2_gene16957 0.5kb downstream 0.5kb downstream 4363 true Tp57577_TGAC_v2_LG1: 4382728-4387090 Trifolium pratense
Tp57577_TGAC_v2_gene16957 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 4386591-4387090 Trifolium pratense
Tp57577_TGAC_v2_gene16957 1.0kb upstream 1.0kb upstream 4863 true Tp57577_TGAC_v2_LG1: 4381728-4386590 Trifolium pratense
Tp57577_TGAC_v2_gene16957 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 4381728-4382727 Trifolium pratense
Tp57577_TGAC_v2_gene16957 1.0kb downstream 1.0kb downstream 4863 true Tp57577_TGAC_v2_LG1: 4382728-4387590 Trifolium pratense
Tp57577_TGAC_v2_gene16957 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 4386591-4387590 Trifolium pratense
Tp57577_TGAC_v2_gene16957 2.0kb upstream 2.0kb upstream 5863 true Tp57577_TGAC_v2_LG1: 4380728-4386590 Trifolium pratense
Tp57577_TGAC_v2_gene16957 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 4380728-4382727 Trifolium pratense
Tp57577_TGAC_v2_gene16957 2.0kb downstream 2.0kb downstream 5863 true Tp57577_TGAC_v2_LG1: 4382728-4388590 Trifolium pratense
Tp57577_TGAC_v2_gene16957 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 4386591-4388590 Trifolium pratense
Tp57577_TGAC_v2_gene16957 5.0kb upstream 5.0kb upstream 8863 true Tp57577_TGAC_v2_LG1: 4377728-4386590 Trifolium pratense
Tp57577_TGAC_v2_gene16957 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 4377728-4382727 Trifolium pratense
Tp57577_TGAC_v2_gene16957 5.0kb downstream 5.0kb downstream 8863 true Tp57577_TGAC_v2_LG1: 4382728-4391590 Trifolium pratense
Tp57577_TGAC_v2_gene16957 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 4386591-4391590 Trifolium pratense
Tp57577_TGAC_v2_gene16957 10.0kb upstream 10.0kb upstream 13863 true Tp57577_TGAC_v2_LG1: 4372728-4386590 Trifolium pratense
Tp57577_TGAC_v2_gene16957 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 4372728-4382727 Trifolium pratense
Tp57577_TGAC_v2_gene16957 10.0kb downstream 10.0kb downstream 13863 true Tp57577_TGAC_v2_LG1: 4382728-4396590 Trifolium pratense
Tp57577_TGAC_v2_gene16957 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 4386591-4396590 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305553 5265 Fabidae View MSA
124067214 5270 Rosid View MSA
123743998 5271 Pentapetalae View MSA
122789343 5272 Eudicot View MSA
122044704 5273 Angiosperm View MSA
121310332 5274 Embryophyte View MSA
123347845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain