Gene : Tp57577_TGAC_v2_gene35901 T. pratense v2
Defline:  (1 of 1) 1.3.3.3 - Coproporphyrinogen oxidase / Coproporphyrinogenase Genomic Order:  20
Name:  ? Tp57577_TGAC_v2_gene35901 Secondary Identifier:  ? PAC:35953639
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense CHLOROPHYLL-SYN Trifolium pratense pathologic  
Tpratense HEME-BIOSYNTHESIS-II Trifolium pratense pathologic  
Tpratense PWY-5918 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene35901 0.5kb upstream 0.5kb upstream 4074 true Tp57577_TGAC_v2_scaf_666: 109791-113864 Trifolium pratense
Tp57577_TGAC_v2_gene35901 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_666: 109791-110290 Trifolium pratense
Tp57577_TGAC_v2_gene35901 0.5kb downstream 0.5kb downstream 4074 true Tp57577_TGAC_v2_scaf_666: 110291-114364 Trifolium pratense
Tp57577_TGAC_v2_gene35901 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_666: 113865-114364 Trifolium pratense
Tp57577_TGAC_v2_gene35901 1.0kb upstream 1.0kb upstream 4574 true Tp57577_TGAC_v2_scaf_666: 109291-113864 Trifolium pratense
Tp57577_TGAC_v2_gene35901 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_666: 109291-110290 Trifolium pratense
Tp57577_TGAC_v2_gene35901 1.0kb downstream 1.0kb downstream 4574 true Tp57577_TGAC_v2_scaf_666: 110291-114864 Trifolium pratense
Tp57577_TGAC_v2_gene35901 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_666: 113865-114864 Trifolium pratense
Tp57577_TGAC_v2_gene35901 2.0kb upstream 2.0kb upstream 5574 true Tp57577_TGAC_v2_scaf_666: 108291-113864 Trifolium pratense
Tp57577_TGAC_v2_gene35901 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_666: 108291-110290 Trifolium pratense
Tp57577_TGAC_v2_gene35901 2.0kb downstream 2.0kb downstream 5574 true Tp57577_TGAC_v2_scaf_666: 110291-115864 Trifolium pratense
Tp57577_TGAC_v2_gene35901 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_666: 113865-115864 Trifolium pratense
Tp57577_TGAC_v2_gene35901 5.0kb upstream 5.0kb upstream 8574 true Tp57577_TGAC_v2_scaf_666: 105291-113864 Trifolium pratense
Tp57577_TGAC_v2_gene35901 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_666: 105291-110290 Trifolium pratense
Tp57577_TGAC_v2_gene35901 5.0kb downstream 5.0kb downstream 8574 true Tp57577_TGAC_v2_scaf_666: 110291-118864 Trifolium pratense
Tp57577_TGAC_v2_gene35901 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_666: 113865-118864 Trifolium pratense
Tp57577_TGAC_v2_gene35901 10.0kb upstream 10.0kb upstream 13574 true Tp57577_TGAC_v2_scaf_666: 100291-113864 Trifolium pratense
Tp57577_TGAC_v2_gene35901 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_666: 100291-110290 Trifolium pratense
Tp57577_TGAC_v2_gene35901 10.0kb downstream 10.0kb downstream 13574 true Tp57577_TGAC_v2_scaf_666: 110291-123864 Trifolium pratense
Tp57577_TGAC_v2_gene35901 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_666: 113865-123864 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308564 5265 Fabidae View MSA
124062707 5270 Rosid View MSA
123737615 5271 Pentapetalae View MSA
122790941 5272 Eudicot View MSA
122043250 5273 Angiosperm View MSA
121345223 5274 Embryophyte View MSA
123424727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain