Gene : Tp57577_TGAC_v2_gene16033 T. pratense v2
Defline:  (1 of 6) K10775 - phenylalanine ammonia-lyase (E4.3.1.24) Genomic Order:  7
Name:  ? Tp57577_TGAC_v2_gene16033 Secondary Identifier:  ? PAC:35982698
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1121 Trifolium pratense pathologic  
Tpratense PWY1F-467 Trifolium pratense pathologic  
Tpratense PWY-7186 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene16033 0.5kb upstream 0.5kb upstream 3719 true Tp57577_TGAC_v2_scaf_235: 75236-78954 Trifolium pratense
Tp57577_TGAC_v2_gene16033 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_235: 75236-75735 Trifolium pratense
Tp57577_TGAC_v2_gene16033 0.5kb downstream 0.5kb downstream 3719 true Tp57577_TGAC_v2_scaf_235: 75736-79454 Trifolium pratense
Tp57577_TGAC_v2_gene16033 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_235: 78955-79454 Trifolium pratense
Tp57577_TGAC_v2_gene16033 1.0kb upstream 1.0kb upstream 4219 true Tp57577_TGAC_v2_scaf_235: 74736-78954 Trifolium pratense
Tp57577_TGAC_v2_gene16033 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_235: 74736-75735 Trifolium pratense
Tp57577_TGAC_v2_gene16033 1.0kb downstream 1.0kb downstream 4219 true Tp57577_TGAC_v2_scaf_235: 75736-79954 Trifolium pratense
Tp57577_TGAC_v2_gene16033 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_235: 78955-79954 Trifolium pratense
Tp57577_TGAC_v2_gene16033 2.0kb upstream 2.0kb upstream 5219 true Tp57577_TGAC_v2_scaf_235: 73736-78954 Trifolium pratense
Tp57577_TGAC_v2_gene16033 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_235: 73736-75735 Trifolium pratense
Tp57577_TGAC_v2_gene16033 2.0kb downstream 2.0kb downstream 5219 true Tp57577_TGAC_v2_scaf_235: 75736-80954 Trifolium pratense
Tp57577_TGAC_v2_gene16033 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_235: 78955-80954 Trifolium pratense
Tp57577_TGAC_v2_gene16033 5.0kb upstream 5.0kb upstream 8219 true Tp57577_TGAC_v2_scaf_235: 70736-78954 Trifolium pratense
Tp57577_TGAC_v2_gene16033 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_235: 70736-75735 Trifolium pratense
Tp57577_TGAC_v2_gene16033 5.0kb downstream 5.0kb downstream 8219 true Tp57577_TGAC_v2_scaf_235: 75736-83954 Trifolium pratense
Tp57577_TGAC_v2_gene16033 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_235: 78955-83954 Trifolium pratense
Tp57577_TGAC_v2_gene16033 10.0kb upstream 10.0kb upstream 13219 true Tp57577_TGAC_v2_scaf_235: 65736-78954 Trifolium pratense
Tp57577_TGAC_v2_gene16033 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_235: 65736-75735 Trifolium pratense
Tp57577_TGAC_v2_gene16033 10.0kb downstream 10.0kb downstream 13219 true Tp57577_TGAC_v2_scaf_235: 75736-88954 Trifolium pratense
Tp57577_TGAC_v2_gene16033 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_235: 78955-88954 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311537 5265 Fabidae View MSA
124070450 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain