Gene : Tp57577_TGAC_v2_gene17421 T. pratense v2
Defline:  (1 of 1) PTHR10795:SF322 - SUBTILISIN SERINE PROTEASE-RELATED Genomic Order:  44
Name:  ? Tp57577_TGAC_v2_gene17421 Secondary Identifier:  ? PAC:35966679
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene17421 0.5kb upstream 0.5kb upstream 3634 true Tp57577_TGAC_v2_scaf_229: 331062-334695 Trifolium pratense
Tp57577_TGAC_v2_gene17421 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_229: 334196-334695 Trifolium pratense
Tp57577_TGAC_v2_gene17421 0.5kb downstream 0.5kb downstream 3634 true Tp57577_TGAC_v2_scaf_229: 330562-334195 Trifolium pratense
Tp57577_TGAC_v2_gene17421 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_229: 330562-331061 Trifolium pratense
Tp57577_TGAC_v2_gene17421 1.0kb upstream 1.0kb upstream 4134 true Tp57577_TGAC_v2_scaf_229: 331062-335195 Trifolium pratense
Tp57577_TGAC_v2_gene17421 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_229: 334196-335195 Trifolium pratense
Tp57577_TGAC_v2_gene17421 1.0kb downstream 1.0kb downstream 4134 true Tp57577_TGAC_v2_scaf_229: 330062-334195 Trifolium pratense
Tp57577_TGAC_v2_gene17421 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_229: 330062-331061 Trifolium pratense
Tp57577_TGAC_v2_gene17421 2.0kb upstream 2.0kb upstream 5134 true Tp57577_TGAC_v2_scaf_229: 331062-336195 Trifolium pratense
Tp57577_TGAC_v2_gene17421 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_229: 334196-336195 Trifolium pratense
Tp57577_TGAC_v2_gene17421 2.0kb downstream 2.0kb downstream 5134 true Tp57577_TGAC_v2_scaf_229: 329062-334195 Trifolium pratense
Tp57577_TGAC_v2_gene17421 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_229: 329062-331061 Trifolium pratense
Tp57577_TGAC_v2_gene17421 5.0kb upstream 5.0kb upstream 5362 true Tp57577_TGAC_v2_scaf_229: 331062-336423 Trifolium pratense
Tp57577_TGAC_v2_gene17421 5.0kb upstream 5.0kb upstream 2228 false Tp57577_TGAC_v2_scaf_229: 334196-336423 Trifolium pratense
Tp57577_TGAC_v2_gene17421 5.0kb downstream 5.0kb downstream 8134 true Tp57577_TGAC_v2_scaf_229: 326062-334195 Trifolium pratense
Tp57577_TGAC_v2_gene17421 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_229: 326062-331061 Trifolium pratense
Tp57577_TGAC_v2_gene17421 10.0kb upstream 10.0kb upstream 5362 true Tp57577_TGAC_v2_scaf_229: 331062-336423 Trifolium pratense
Tp57577_TGAC_v2_gene17421 10.0kb upstream 10.0kb upstream 2228 false Tp57577_TGAC_v2_scaf_229: 334196-336423 Trifolium pratense
Tp57577_TGAC_v2_gene17421 10.0kb downstream 10.0kb downstream 13134 true Tp57577_TGAC_v2_scaf_229: 321062-334195 Trifolium pratense
Tp57577_TGAC_v2_gene17421 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_229: 321062-331061 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041372 5273 Angiosperm View MSA
122299603 5265 Fabidae View MSA
124063321 5270 Rosid View MSA
123738006 5271 Pentapetalae View MSA
122788019 5272 Eudicot View MSA
121349729 5274 Embryophyte View MSA
123428602 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain