Gene : Tp57577_TGAC_v2_gene12969 T. pratense v2
Defline:  (1 of 3) PTHR19856 - WD-REPEATCONTAINING PROTEIN WDR1 Genomic Order:  202
Name:  ? Tp57577_TGAC_v2_gene12969 Secondary Identifier:  ? PAC:35990681
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12969 0.5kb upstream 0.5kb upstream 5377 true Tp57577_TGAC_v2_LG3: 1684201-1689577 Trifolium pratense
Tp57577_TGAC_v2_gene12969 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 1684201-1684700 Trifolium pratense
Tp57577_TGAC_v2_gene12969 0.5kb downstream 0.5kb downstream 5377 true Tp57577_TGAC_v2_LG3: 1684701-1690077 Trifolium pratense
Tp57577_TGAC_v2_gene12969 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 1689578-1690077 Trifolium pratense
Tp57577_TGAC_v2_gene12969 1.0kb upstream 1.0kb upstream 5877 true Tp57577_TGAC_v2_LG3: 1683701-1689577 Trifolium pratense
Tp57577_TGAC_v2_gene12969 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 1683701-1684700 Trifolium pratense
Tp57577_TGAC_v2_gene12969 1.0kb downstream 1.0kb downstream 5877 true Tp57577_TGAC_v2_LG3: 1684701-1690577 Trifolium pratense
Tp57577_TGAC_v2_gene12969 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 1689578-1690577 Trifolium pratense
Tp57577_TGAC_v2_gene12969 2.0kb upstream 2.0kb upstream 6877 true Tp57577_TGAC_v2_LG3: 1682701-1689577 Trifolium pratense
Tp57577_TGAC_v2_gene12969 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 1682701-1684700 Trifolium pratense
Tp57577_TGAC_v2_gene12969 2.0kb downstream 2.0kb downstream 6877 true Tp57577_TGAC_v2_LG3: 1684701-1691577 Trifolium pratense
Tp57577_TGAC_v2_gene12969 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 1689578-1691577 Trifolium pratense
Tp57577_TGAC_v2_gene12969 5.0kb upstream 5.0kb upstream 9877 true Tp57577_TGAC_v2_LG3: 1679701-1689577 Trifolium pratense
Tp57577_TGAC_v2_gene12969 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 1679701-1684700 Trifolium pratense
Tp57577_TGAC_v2_gene12969 5.0kb downstream 5.0kb downstream 9877 true Tp57577_TGAC_v2_LG3: 1684701-1694577 Trifolium pratense
Tp57577_TGAC_v2_gene12969 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 1689578-1694577 Trifolium pratense
Tp57577_TGAC_v2_gene12969 10.0kb upstream 10.0kb upstream 14877 true Tp57577_TGAC_v2_LG3: 1674701-1689577 Trifolium pratense
Tp57577_TGAC_v2_gene12969 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 1674701-1684700 Trifolium pratense
Tp57577_TGAC_v2_gene12969 10.0kb downstream 10.0kb downstream 14877 true Tp57577_TGAC_v2_LG3: 1684701-1699577 Trifolium pratense
Tp57577_TGAC_v2_gene12969 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 1689578-1699577 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299766 5265 Fabidae View MSA
124062594 5270 Rosid View MSA
123741573 5271 Pentapetalae View MSA
122790877 5272 Eudicot View MSA
122044003 5273 Angiosperm View MSA
121344306 5274 Embryophyte View MSA
123425360 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain