Gene : Tp57577_TGAC_v2_gene12173 T. pratense v2
Defline:  (1 of 1) PTHR13301//PTHR13301:SF61 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3474
Name:  ? Tp57577_TGAC_v2_gene12173 Secondary Identifier:  ? PAC:35987359
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1001 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12173 0.5kb upstream 0.5kb upstream 13118 true Tp57577_TGAC_v2_LG3: 29720444-29733561 Trifolium pratense
Tp57577_TGAC_v2_gene12173 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 29733062-29733561 Trifolium pratense
Tp57577_TGAC_v2_gene12173 0.5kb downstream 0.5kb downstream 13118 true Tp57577_TGAC_v2_LG3: 29719944-29733061 Trifolium pratense
Tp57577_TGAC_v2_gene12173 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 29719944-29720443 Trifolium pratense
Tp57577_TGAC_v2_gene12173 1.0kb upstream 1.0kb upstream 13618 true Tp57577_TGAC_v2_LG3: 29720444-29734061 Trifolium pratense
Tp57577_TGAC_v2_gene12173 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 29733062-29734061 Trifolium pratense
Tp57577_TGAC_v2_gene12173 1.0kb downstream 1.0kb downstream 13618 true Tp57577_TGAC_v2_LG3: 29719444-29733061 Trifolium pratense
Tp57577_TGAC_v2_gene12173 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 29719444-29720443 Trifolium pratense
Tp57577_TGAC_v2_gene12173 2.0kb upstream 2.0kb upstream 14618 true Tp57577_TGAC_v2_LG3: 29720444-29735061 Trifolium pratense
Tp57577_TGAC_v2_gene12173 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 29733062-29735061 Trifolium pratense
Tp57577_TGAC_v2_gene12173 2.0kb downstream 2.0kb downstream 14618 true Tp57577_TGAC_v2_LG3: 29718444-29733061 Trifolium pratense
Tp57577_TGAC_v2_gene12173 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 29718444-29720443 Trifolium pratense
Tp57577_TGAC_v2_gene12173 5.0kb upstream 5.0kb upstream 17618 true Tp57577_TGAC_v2_LG3: 29720444-29738061 Trifolium pratense
Tp57577_TGAC_v2_gene12173 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 29733062-29738061 Trifolium pratense
Tp57577_TGAC_v2_gene12173 5.0kb downstream 5.0kb downstream 17618 true Tp57577_TGAC_v2_LG3: 29715444-29733061 Trifolium pratense
Tp57577_TGAC_v2_gene12173 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 29715444-29720443 Trifolium pratense
Tp57577_TGAC_v2_gene12173 10.0kb upstream 10.0kb upstream 22618 true Tp57577_TGAC_v2_LG3: 29720444-29743061 Trifolium pratense
Tp57577_TGAC_v2_gene12173 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 29733062-29743061 Trifolium pratense
Tp57577_TGAC_v2_gene12173 10.0kb downstream 10.0kb downstream 22618 true Tp57577_TGAC_v2_LG3: 29710444-29733061 Trifolium pratense
Tp57577_TGAC_v2_gene12173 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 29710444-29720443 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314851 5265 Fabidae View MSA
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain