Gene : Tp57577_TGAC_v2_gene12832 T. pratense v2
Defline:  (1 of 2) PTHR31500:SF9 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  368
Name:  ? Tp57577_TGAC_v2_gene12832 Secondary Identifier:  ? PAC:35988660
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene12832 0.5kb upstream 0.5kb upstream 3569 true Tp57577_TGAC_v2_LG3: 2817973-2821541 Trifolium pratense
Tp57577_TGAC_v2_gene12832 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 2821042-2821541 Trifolium pratense
Tp57577_TGAC_v2_gene12832 0.5kb downstream 0.5kb downstream 3569 true Tp57577_TGAC_v2_LG3: 2817473-2821041 Trifolium pratense
Tp57577_TGAC_v2_gene12832 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 2817473-2817972 Trifolium pratense
Tp57577_TGAC_v2_gene12832 1.0kb upstream 1.0kb upstream 4069 true Tp57577_TGAC_v2_LG3: 2817973-2822041 Trifolium pratense
Tp57577_TGAC_v2_gene12832 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 2821042-2822041 Trifolium pratense
Tp57577_TGAC_v2_gene12832 1.0kb downstream 1.0kb downstream 4069 true Tp57577_TGAC_v2_LG3: 2816973-2821041 Trifolium pratense
Tp57577_TGAC_v2_gene12832 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 2816973-2817972 Trifolium pratense
Tp57577_TGAC_v2_gene12832 2.0kb upstream 2.0kb upstream 5069 true Tp57577_TGAC_v2_LG3: 2817973-2823041 Trifolium pratense
Tp57577_TGAC_v2_gene12832 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 2821042-2823041 Trifolium pratense
Tp57577_TGAC_v2_gene12832 2.0kb downstream 2.0kb downstream 5069 true Tp57577_TGAC_v2_LG3: 2815973-2821041 Trifolium pratense
Tp57577_TGAC_v2_gene12832 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 2815973-2817972 Trifolium pratense
Tp57577_TGAC_v2_gene12832 5.0kb upstream 5.0kb upstream 8069 true Tp57577_TGAC_v2_LG3: 2817973-2826041 Trifolium pratense
Tp57577_TGAC_v2_gene12832 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 2821042-2826041 Trifolium pratense
Tp57577_TGAC_v2_gene12832 5.0kb downstream 5.0kb downstream 8069 true Tp57577_TGAC_v2_LG3: 2812973-2821041 Trifolium pratense
Tp57577_TGAC_v2_gene12832 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 2812973-2817972 Trifolium pratense
Tp57577_TGAC_v2_gene12832 10.0kb upstream 10.0kb upstream 13069 true Tp57577_TGAC_v2_LG3: 2817973-2831041 Trifolium pratense
Tp57577_TGAC_v2_gene12832 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 2821042-2831041 Trifolium pratense
Tp57577_TGAC_v2_gene12832 10.0kb downstream 10.0kb downstream 13069 true Tp57577_TGAC_v2_LG3: 2807973-2821041 Trifolium pratense
Tp57577_TGAC_v2_gene12832 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 2807973-2817972 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041209 5273 Angiosperm View MSA
122313291 5265 Fabidae View MSA
124069510 5270 Rosid View MSA
123741988 5271 Pentapetalae View MSA
122789787 5272 Eudicot View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain